Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0354
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   2.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   6.0  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 583 HHSPLVSHLKMV*YILK 533
           +HSPL S+ K+V +ILK
Sbjct: 41  YHSPLESNHKLVTFILK 57


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 595 QKQLHHSPLVSHLK 554
           Q  LHH+P+  HLK
Sbjct: 344 QAMLHHNPMSHHLK 357


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 611 LLSQPYFLI*QWTPNCN 661
           LLSQ +  +  W+PNC+
Sbjct: 225 LLSQAWISVHIWSPNCD 241


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 611 LLSQPYFLI*QWTPNCN 661
           LLSQ +  +  W+PNC+
Sbjct: 458 LLSQAWISVHIWSPNCD 474


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 611 LLSQPYFLI*QWTPNCN 661
           LLSQ +  +  W+PNC+
Sbjct: 458 LLSQAWISVHIWSPNCD 474


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 611 LLSQPYFLI*QWTPNC 658
           LLSQ +  +  WTP C
Sbjct: 471 LLSQTWITLHIWTPKC 486


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 611 LLSQPYFLI*QWTPNC 658
           LLSQ +  +  WTP C
Sbjct: 471 LLSQTWITLHIWTPKC 486


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 611 LLSQPYFLI*QWTPNC 658
           LLSQ +  +  WTP C
Sbjct: 471 LLSQTWITLHIWTPKC 486


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 611 LLSQPYFLI*QWTPNC 658
           LLSQ +  +  WTP C
Sbjct: 471 LLSQTWITLHIWTPKC 486


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 183 LVAKLSYVSI*RVGCIIWTEV 245
           LVA L++V+I      +WT++
Sbjct: 401 LVANLAFVTIVTYETFVWTQI 421


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,652
Number of Sequences: 336
Number of extensions: 3458
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)