Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0354
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 58 2e-08
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 53 5e-07
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 51 1e-06
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 51 1e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 47 2e-05
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 47 2e-05
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 47 2e-05
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 46 4e-05
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 43 5e-04
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 41 0.002
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 41 0.002
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 41 0.002
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 41 0.002
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 40 0.005
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 40 0.005
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 38 0.011
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 37 0.025
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 35 0.14
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 35 0.14
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 35 0.14
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 35 0.14
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 35 0.14
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 35 0.14
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 34 0.24
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 33 0.31
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 32 0.95
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 57.6 bits (133), Expect = 2e-08
Identities = 38/127 (29%), Positives = 59/127 (46%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVH 474
PQGS+LGP L+LIY D+P+ SR V FADDT++L + + +Q ++ + +
Sbjct: 639 PQGSVLGPTLYLIYTADIPT--NSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKK 696
Query: 475 WFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXXFLNITVDSK 654
W + +N +K K + FTL RQ +L + +D +
Sbjct: 697 WLSDWRIKVNEQKCKHVTFTLN--------RQDCPPLLLNSIPLPKADEVTYLGVHLDRR 748
Query: 655 LQWGPHI 675
L W HI
Sbjct: 749 LTWRRHI 755
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 52.8 bits (121), Expect = 5e-07
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPS---FIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISC 465
PQGS+LGP L+ +Y +D+P + + + FADD + ++ + + D + D
Sbjct: 641 PQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYR 700
Query: 466 VVHWFRINNLLLNSKKTKCIKFTLK 540
W R N+ +NS K+ + FTLK
Sbjct: 701 FSEWARRWNIGINSSKSNNVCFTLK 725
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 51.2 bits (117), Expect = 1e-06
Identities = 34/127 (26%), Positives = 56/127 (44%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVH 474
PQGS+LGP L+ +Y D P I+ FADDT++L + K ++ ++ ++ V
Sbjct: 637 PQGSVLGPILYTLYTADFP--IDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVER 694
Query: 475 WFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXXFLNITVDSK 654
W + +N +K K + FTL +Q +L + +D +
Sbjct: 695 WLADWRISINVQKCKQVTFTLN--------KQTCPPLVLNNICIPQADEVTYLGVHLDRR 746
Query: 655 LQWGPHI 675
L W HI
Sbjct: 747 LTWRKHI 753
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 51.2 bits (117), Expect = 1e-06
Identities = 34/127 (26%), Positives = 56/127 (44%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVH 474
PQGS+LGP L+ +Y D P I+ FADDT++L + K ++ ++ ++ V
Sbjct: 637 PQGSVLGPILYTLYTADFP--IDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVER 694
Query: 475 WFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXXFLNITVDSK 654
W + +N +K K + FTL +Q +L + +D +
Sbjct: 695 WLADWRISINVQKCKQVTFTLN--------KQTCPPLVLNNICIPQADEVTYLGVHLDRR 746
Query: 655 LQWGPHI 675
L W HI
Sbjct: 747 LTWRKHI 753
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 47.2 bits (107), Expect = 2e-05
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPS---FIESRHEVVL---FADDTSLLFKIKRQLQVYDEVNDA 456
PQGS+LGP L+ ++ +D+P+ E E VL +ADDT++L K K L + +
Sbjct: 643 PQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEY 702
Query: 457 ISCVVHWFRINNLLLNSKKTKCIKF---TLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXX 627
+ W N+ +N++K + F T C SLN R
Sbjct: 703 LDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLNGR-----------LIRHHQAYK 751
Query: 628 FLNITVDSKLQWGPHI 675
+L IT+D KL + HI
Sbjct: 752 YLGITLDRKLTFSRHI 767
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 47.2 bits (107), Expect = 2e-05
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPS---FIESRHEVVL---FADDTSLLFKIKRQLQVYDEVNDA 456
PQGS+LGP L+ ++ +D+P+ E E VL +ADDT++L K K L + +
Sbjct: 445 PQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEY 504
Query: 457 ISCVVHWFRINNLLLNSKKTKCIKF---TLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXX 627
+ W N+ +N++K + F T C SLN R
Sbjct: 505 LDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLNGR-----------LIRHHQAYK 553
Query: 628 FLNITVDSKLQWGPHI 675
+L IT+D KL + HI
Sbjct: 554 YLGITLDRKLTFSRHI 569
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 295 PQGSILGPFLF-LIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVV 471
PQGS+LGP L+ +Y L + R E+V FADD +LL K + + N I +
Sbjct: 52 PQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRAIE 111
Query: 472 HWFRINNLLLNSKKTKCI 525
HW L L +KTK +
Sbjct: 112 HWLSSMGLELAPEKTKAV 129
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 46.4 bits (105), Expect = 4e-05
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP-----SFIESRHEVV-LFADDTSLLFKIKRQLQVYDEVNDA 456
PQGS+LGP L+ ++ DLP + R ++ +ADD +LL+ + + +
Sbjct: 642 PQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEY 701
Query: 457 ISCVVHWFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXXFLN 636
++ + W + L +N +KT FTLK + P +L
Sbjct: 702 LTTLAAWCKRWILKVNPQKTINPCFTLKTLSP------VTAPIELEGVILDQPSQAKYLG 755
Query: 637 ITVDSKLQWGPHI 675
IT+D +L +GPH+
Sbjct: 756 ITLDKRLTFGPHL 768
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 42.7 bits (96), Expect = 5e-04
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPSFIESRH-EVVLFADDTSLLFKIKRQLQVYDEVNDAISCVV 471
PQGS+LGP L+ I + + S + R E+ FADD ++ K ++ D N AI+ +
Sbjct: 614 PQGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITAAI 673
Query: 472 HWFRINNLLLNSKKTKCI 525
W L + + KT+ +
Sbjct: 674 EWLEKVGLKIAAHKTEVV 691
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 41.1 bits (92), Expect = 0.002
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDTSLLFKIKRQLQ 432
PQGSILGP L+ IY +D+P SF + ++ +ADDT +L + K
Sbjct: 243 PQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKL 302
Query: 433 VYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 540
+ + ++ W + ++ +N+KKT I F+LK
Sbjct: 303 AINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 338
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 41.1 bits (92), Expect = 0.002
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDTSLLFKIKRQLQ 432
PQGSILGP L+ IY +D+P SF + ++ +ADDT +L + K
Sbjct: 690 PQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKL 749
Query: 433 VYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 540
+ + ++ W + ++ +N+KKT I F+LK
Sbjct: 750 AINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 785
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 41.1 bits (92), Expect = 0.002
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDTSLLFKIKRQLQ 432
PQGSILGP L+ IY +D+P SF + ++ +ADDT +L + K
Sbjct: 690 PQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKL 749
Query: 433 VYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 540
+ + ++ W + ++ +N+KKT I F+LK
Sbjct: 750 AINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 785
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 41.1 bits (92), Expect = 0.002
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP-----------SFIESRHEVVL---FADDTSLLFKIKRQLQ 432
PQGSILGP L+ IY +D+P SF + ++ +ADDT +L + K
Sbjct: 690 PQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKL 749
Query: 433 VYDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLK 540
+ + ++ W + ++ +N+KKT I F+LK
Sbjct: 750 AINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLK 785
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 39.5 bits (88), Expect = 0.005
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVH 474
PQGS+LGP LF I+ +D+P + + LFADD ++ ++ + ++ +
Sbjct: 667 PQGSVLGPTLFNIFTHDIPQ--ATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDI 724
Query: 475 WFRINNLLLNSKKTKCIKFT 534
+++ + +N KT I FT
Sbjct: 725 YYKKWKIKINPNKTNAIFFT 744
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 39.5 bits (88), Expect = 0.005
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVH 474
PQGS+LGP LF I+ +D+P + + LFADD ++ ++ + ++ +
Sbjct: 615 PQGSVLGPTLFNIFTHDIPQ--ATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDI 672
Query: 475 WFRINNLLLNSKKTKCIKFT 534
+++ + +N KT I FT
Sbjct: 673 YYKKWKIKINPNKTNAIFFT 692
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 38.3 bits (85), Expect = 0.011
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLL 408
PQGS+LGP L+ +Y D+P+ + + FADDT+++
Sbjct: 178 PQGSVLGPILYTLYTADIPT--NYQLTIFTFADDTAII 213
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 37.1 bits (82), Expect = 0.025
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP-SFI-----ESRHEVVLFADDTSLLFKIKRQLQVYDEVNDA 456
PQGS LGP L+ I+ +D+P +I R + +ADDT +L +
Sbjct: 699 PQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENY 758
Query: 457 ISCVVHWFRINNLLLNSKKTKCIKFTLKCIKP--SLNVRQXXXXXXXXXXXXXXXXXXXF 630
+ W + +N+ KT + FTLK P S+NV+ +
Sbjct: 759 LKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVK-------IKGQTIKKESKQSY 811
Query: 631 LNITVDSKLQWGPHI 675
L +T+DSKL H+
Sbjct: 812 LGVTLDSKLTLSSHV 826
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 34.7 bits (76), Expect = 0.14
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKRQLQVYDEVNDA 456
PQGS LGP L+ I+ +D+P + S E ++ +ADDT +L +
Sbjct: 571 PQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENY 630
Query: 457 ISCVVHWFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXXFLN 636
+ W + +N+ KT + +TLK P+ N++ +L
Sbjct: 631 LKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT-NLK----TMKIKGQAIKKESKQSYLG 685
Query: 637 ITVDSKLQWGPHI 675
+ +DSKL PH+
Sbjct: 686 VILDSKLTLSPHV 698
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 34.7 bits (76), Expect = 0.14
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKRQLQVYDEVNDA 456
PQGS LGP L+ I+ +D+P + S E ++ +ADDT +L +
Sbjct: 687 PQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENY 746
Query: 457 ISCVVHWFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXXFLN 636
+ W + +N+ KT + +TLK P+ N++ +L
Sbjct: 747 LKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT-NLK----TMKIKGQAIKKESKQSYLG 801
Query: 637 ITVDSKLQWGPHI 675
+ +DSKL PH+
Sbjct: 802 VILDSKLTLSPHV 814
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 34.7 bits (76), Expect = 0.14
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKRQLQVYDEVNDA 456
PQGS LGP L+ I+ +D+P + S E ++ +ADDT +L +
Sbjct: 687 PQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENY 746
Query: 457 ISCVVHWFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXXFLN 636
+ W + +N+ KT + +TLK P+ N++ +L
Sbjct: 747 LKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT-NLK----TMKIKGQAIKKESKQSYLG 801
Query: 637 ITVDSKLQWGPHI 675
+ +DSKL PH+
Sbjct: 802 VILDSKLTLSPHV 814
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 34.7 bits (76), Expect = 0.14
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKRQLQVYDEVNDA 456
PQGS LGP L+ I+ +D+P + S E ++ +ADDT +L +
Sbjct: 649 PQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENY 708
Query: 457 ISCVVHWFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXXFLN 636
+ W + +N+ KT + +TLK P+ N++ +L
Sbjct: 709 LKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT-NLK----TMKIKGQAIKKESKQSYLG 763
Query: 637 ITVDSKLQWGPHI 675
+ +DSKL PH+
Sbjct: 764 VILDSKLTLSPHV 776
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 34.7 bits (76), Expect = 0.14
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKRQLQVYDEVNDA 456
PQGS LGP L+ I+ +D+P + S E ++ +ADDT +L +
Sbjct: 687 PQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENY 746
Query: 457 ISCVVHWFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXXFLN 636
+ W + +N+ KT + +TLK P+ N++ +L
Sbjct: 747 LKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT-NLK----TMKIKGQAIKKESKQSYLG 801
Query: 637 ITVDSKLQWGPHI 675
+ +DSKL PH+
Sbjct: 802 VILDSKLTLSPHV 814
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 34.7 bits (76), Expect = 0.14
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPSFIESRHE---VVLFADDTSLLFKIKRQLQVYDEVNDAISC 465
PQGS L LF+I I D+ + +RH+ + L+ADD + KIK V ++ + +
Sbjct: 642 PQGSPLSVVLFMIAIEDINDIV-TRHKDIYISLYADDAIIFTKIKNINTVREKFLEILQE 700
Query: 466 VVHWFRINNLLLNSKKTKCIKFTLK 540
+ W + L +K + + K
Sbjct: 701 INSWGATSGASLAIEKCQTLHICRK 725
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 33.9 bits (74), Expect = 0.24
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 2/130 (1%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPSFIESRHEVVL--FADDTSLLFKIKRQLQVYDEVNDAISCV 468
PQGS + LFLI N L + I E+ +ADD L+ + +++ +
Sbjct: 634 PQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNKNTNTNFNLDNLFDDI 693
Query: 469 VHWFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQXXXXXXXXXXXXXXXXXXXFLNITVD 648
+W + L+ K + + K R L IT++
Sbjct: 694 ENWCSYSGASLSLSKCQHLHICRK--------RHCTCKISCNNFQIPSVTSLKILGITLN 745
Query: 649 SKLQWGPHIH 678
+K +W HI+
Sbjct: 746 NKYKWNTHIN 755
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 33.5 bits (73), Expect = 0.31
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLP---SFIESRHEVVL---FADDTSLLFKIKRQLQVYDEVNDA 456
PQGS LGP L+ I+ +D+P + S E ++ +ADDT +L +
Sbjct: 687 PQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENY 746
Query: 457 ISCVVHWFRINNLLLNSKKTKCIKFTLK 540
+ W + +N+ KT + FTLK
Sbjct: 747 LKSFSDWADKWGISVNAAKTGHVIFTLK 774
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 31.9 bits (69), Expect = 0.95
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 295 PQGSILGPFLFLIYINDLPSFIESRHEVVLFADDTSLLFKIKRQLQVYDEVNDAISCVVH 474
PQGSI GPF++ I ++ L ++ ++ +ADD LL + + + ++ +S V
Sbjct: 633 PQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQLMSIVET 692
Query: 475 W-FRINNLLLNSK 510
W + + L SK
Sbjct: 693 WGAEVGDCLSTSK 705
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,352,954
Number of Sequences: 53049
Number of extensions: 570653
Number of successful extensions: 1264
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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