Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0353
         (661 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146788-1|AAI46789.1| 1761|Homo sapiens jumonji domain containi...    30   6.4  
BC117693-1|AAI17694.1| 1551|Homo sapiens JMJD1B protein protein.       30   6.4  
BC001202-1|AAH01202.1|  759|Homo sapiens JMJD1B protein protein.       30   6.4  
BC000539-1|AAH00539.2| 1578|Homo sapiens JMJD1B protein protein.       30   6.4  
AF338242-1|AAK13499.1| 1761|Homo sapiens nuclear protein 5qNCA p...    30   6.4  
AF251039-1|AAF63765.1| 1417|Homo sapiens putative zinc finger pr...    30   6.4  
AB029005-1|BAA83034.2| 1787|Homo sapiens KIAA1082 protein protein.     30   6.4  

>BC146788-1|AAI46789.1| 1761|Homo sapiens jumonji domain containing 1B
            protein.
          Length = 1761

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 216  KRCFK*LLAEFHHTMNTHNNLSHSAQRFKVFWHRV 320
            K CF+ L  EF H  NTH N     Q   + +H V
Sbjct: 1711 KHCFR-LTQEFRHLSNTHTNHEDKLQVKNIIYHAV 1744


>BC117693-1|AAI17694.1| 1551|Homo sapiens JMJD1B protein protein.
          Length = 1551

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 216  KRCFK*LLAEFHHTMNTHNNLSHSAQRFKVFWHRV 320
            K CF+ L  EF H  NTH N     Q   + +H V
Sbjct: 1501 KHCFR-LTQEFRHLSNTHTNHEDKLQVKNIIYHAV 1534


>BC001202-1|AAH01202.1|  759|Homo sapiens JMJD1B protein protein.
          Length = 759

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 216 KRCFK*LLAEFHHTMNTHNNLSHSAQRFKVFWHRV 320
           K CF+ L  EF H  NTH N     Q   + +H V
Sbjct: 709 KHCFR-LTQEFRHLSNTHTNHEDKLQVKNIIYHAV 742


>BC000539-1|AAH00539.2| 1578|Homo sapiens JMJD1B protein protein.
          Length = 1578

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 216  KRCFK*LLAEFHHTMNTHNNLSHSAQRFKVFWHRV 320
            K CF+ L  EF H  NTH N     Q   + +H V
Sbjct: 1528 KHCFR-LTQEFRHLSNTHTNHEDKLQVKNIIYHAV 1561


>AF338242-1|AAK13499.1| 1761|Homo sapiens nuclear protein 5qNCA
            protein.
          Length = 1761

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 216  KRCFK*LLAEFHHTMNTHNNLSHSAQRFKVFWHRV 320
            K CF+ L  EF H  NTH N     Q   + +H V
Sbjct: 1711 KHCFR-LTQEFRHLSNTHTNHEDKLQVKNIIYHAV 1744


>AF251039-1|AAF63765.1| 1417|Homo sapiens putative zinc finger protein
            protein.
          Length = 1417

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 216  KRCFK*LLAEFHHTMNTHNNLSHSAQRFKVFWHRV 320
            K CF+ L  EF H  NTH N     Q   + +H V
Sbjct: 1367 KHCFR-LTQEFRHLSNTHTNHEDKLQVKNIIYHAV 1400


>AB029005-1|BAA83034.2| 1787|Homo sapiens KIAA1082 protein protein.
          Length = 1787

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 216  KRCFK*LLAEFHHTMNTHNNLSHSAQRFKVFWHRV 320
            K CF+ L  EF H  NTH N     Q   + +H V
Sbjct: 1737 KHCFR-LTQEFRHLSNTHTNHEDKLQVKNIIYHAV 1770


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,374,710
Number of Sequences: 237096
Number of extensions: 1775504
Number of successful extensions: 3941
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3941
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)