Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0353
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
           protein C10C6.6 protein.
          Length = 1178

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 553 SYVCVFPIDSNGWIEIDEIFR 491
           S+VCV P  +NGW E+ ++ R
Sbjct: 91  SHVCVIPTQNNGWPELVKLMR 111


>Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical
           protein F32H2.1b protein.
          Length = 928

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 127 KRFSTLERMAASRQKWAGSWYLHIKAHNTSNN 32
           KRF  +E M  ++ K    WYLH+ + + + N
Sbjct: 676 KRF--VENMVINKSKEVAEWYLHVNSKSCNQN 705


>Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical
           protein F32H2.1a protein.
          Length = 944

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 127 KRFSTLERMAASRQKWAGSWYLHIKAHNTSNN 32
           KRF  +E M  ++ K    WYLH+ + + + N
Sbjct: 676 KRF--VENMVINKSKEVAEWYLHVNSKSCNQN 705


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,995,689
Number of Sequences: 27780
Number of extensions: 304623
Number of successful extensions: 555
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)