Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0350
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.4  

>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -2

Query: 627  KKMGTKSDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 484
            K++  +S  ++ + N L V   FLL   K  L + W  G+    +YDE
Sbjct: 1262 KELRDQSVFAFFMMNALFVLIVFLLTLKKDYLHIKWPFGVKTNITYDE 1309


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -2

Query: 627  KKMGTKSDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDE 484
            K++  +S  ++ + N L V   FLL   K  L + W  G+    +YDE
Sbjct: 1262 KELRDQSVFAFFMMNALFVLIVFLLTLKKDYLHIKWPFGVKTNITYDE 1309


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 220 LDKLKAERERGITIDIALWKFETSKYYVTII 312
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 220 LDKLKAERERGITIDIALWKFETSKYYVTII 312
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/42 (21%), Positives = 17/42 (40%)
 Frame = +1

Query: 523 PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFRAHFLGWHGKQH 648
           P+       + K     +++ GY P   +++ HF    G  H
Sbjct: 12  PHESNTSTPVSKSAFIELQQHGYGPLRTSYQHHFNSPAGNAH 53


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 327 QRFHQEHDHRNLS 365
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,997
Number of Sequences: 336
Number of extensions: 3745
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)