Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0349
(769 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.88
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.88
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.88
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.88
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 3.6
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 22 4.7
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 21 8.2
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 8.2
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 21 8.2
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.88
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -1
Query: 340 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 212
FA F I F C Q GFSY F N + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 600 EFWWARPDSKTQVTLPNMYLL 662
EFW P +++P+MYLL
Sbjct: 1025 EFWCIVPGIIYLLSIPSMYLL 1045
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.88
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -1
Query: 340 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 212
FA F I F C Q GFSY F N + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 600 EFWWARPDSKTQVTLPNMYLL 662
EFW P +++P+MYLL
Sbjct: 1025 EFWCIVPGIIYLLSIPSMYLL 1045
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.88
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -1
Query: 340 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 212
FA F I F C Q GFSY F N + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 600 EFWWARPDSKTQVTLPNMYLL 662
EFW P +++P+MYLL
Sbjct: 1025 EFWCIVPGIIYLLSIPSMYLL 1045
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.88
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -1
Query: 340 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 212
FA F I F C Q GFSY F N + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 600 EFWWARPDSKTQVTLPNMYLL 662
EFW P +++P+MYLL
Sbjct: 1025 EFWCIVPGIIYLLSIPSMYLL 1045
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 3.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 406 HHTACLVIKAFGRIIITNMFDRFAHNFLII 317
HH +IK+F I + F NFLII
Sbjct: 1308 HHHLSKLIKSFNEIYGVPLLLFFGLNFLII 1337
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 22.2 bits (45), Expect = 4.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 511 CITEHQALVSCPNFLVIS 458
C+ Q L CPN LV +
Sbjct: 48 CVNGQQELYDCPNGLVFA 65
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 548 YGSTACILLSHLLH 507
Y + +LLSHLLH
Sbjct: 291 YATADFVLLSHLLH 304
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 142 QKY*SIFHIITVSVGFRVSIHF*SLRHSEFRV 47
QK+ ++ + +S+G VSI+ S +E +
Sbjct: 32 QKFYAVAFFLALSIGVVVSIYSKSFHRNEIHI 63
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 21.4 bits (43), Expect = 8.2
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -1
Query: 268 FSYGFTCNFCVRILIQ 221
+ Y TC FC+ +L +
Sbjct: 497 YLYRMTCLFCINVLAE 512
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,725
Number of Sequences: 336
Number of extensions: 5000
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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