Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0349
(769 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.) 241 3e-64
SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.) 227 8e-60
SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 3e-41
SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 9e-38
SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056) 85 8e-17
SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0) 46 4e-05
SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23) 31 0.77
SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20) 31 1.0
SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0) 29 3.1
SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9) 29 4.1
SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8) 29 4.1
SB_18779| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5) 29 4.1
SB_6264| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_10239| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9) 29 5.5
SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 28 9.5
SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32) 28 9.5
>SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 241 bits (591), Expect = 3e-64
Identities = 110/138 (79%), Positives = 123/138 (89%)
Frame = +2
Query: 131 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 310
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVACET+ KTGM+LLCGEITS A
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSNA 88
Query: 311 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 490
VDYQ VVR+ +K IGYDDS KGFDYKTC+V++AL+QQS +IA GVH R +E+VGAGDQ
Sbjct: 89 VVDYQSVVRQCIKDIGYDDSEKGFDYKTCNVLVALEQQSVDIAHGVHVGREEEDVGAGDQ 148
Query: 491 GLMFGYATDETEECMPLT 544
GLMFGYATDETEE MPLT
Sbjct: 149 GLMFGYATDETEELMPLT 166
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = +3
Query: 546 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGA 671
VVLAHK+NQK+AE RR+G WARPDSKTQVT+ + G A
Sbjct: 167 VVLAHKMNQKLAEYRRDGTLPWARPDSKTQVTVEYKFEHGRA 208
>SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 227 bits (555), Expect = 8e-60
Identities = 107/144 (74%), Positives = 117/144 (81%)
Frame = +2
Query: 113 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCG 292
Y D FLFTSESV EGH DKMCDQISDA+LDAHL QDP AKVACET TKTG+VLL G
Sbjct: 44 YSTSDCDNFLFTSESVNEGHSDKMCDQISDAVLDAHLEQDPYAKVACETATKTGLVLLFG 103
Query: 293 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEE 472
EITS A VDYQ VVR T++ IGY+DSS GFDYKTCSV+LA+ +Q IA VH NR D+E
Sbjct: 104 EITSNARVDYQAVVRNTIRDIGYNDSSTGFDYKTCSVLLAIQEQVAEIAQTVHLNRRDDE 163
Query: 473 VGAGDQGLMFGYATDETEECMPLT 544
+GAGDQGLMFGYATDETEE MPLT
Sbjct: 164 IGAGDQGLMFGYATDETEELMPLT 187
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 549 VLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGATVP 680
VLAHKL ++AE R+ W PD KTQVT+ + L GA +P
Sbjct: 189 VLAHKLCARLAECRKGKILPWLLPDGKTQVTV-DYRLERGACIP 231
>SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 165 bits (402), Expect = 3e-41
Identities = 72/96 (75%), Positives = 88/96 (91%)
Frame = +2
Query: 257 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 436
++ KTGM+++CGEITS ANVDYQKVVR+T+K IGYDDSSKGFDYKTC+V+ A++QQSP+I
Sbjct: 2 SVAKTGMIVVCGEITSLANVDYQKVVRDTIKQIGYDDSSKGFDYKTCTVLQAIEQQSPDI 61
Query: 437 AAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLT 544
A GVH R+DE++GAGDQGLMFGYATDET+E MPLT
Sbjct: 62 AQGVHIGRSDEDLGAGDQGLMFGYATDETDELMPLT 97
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +3
Query: 546 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGATVP 680
VVLAH LN+++A+ RRNG W RPDSKTQVT+ + GG VP
Sbjct: 98 VVLAHGLNKRLADCRRNGSLPWVRPDSKTQVTVEYKF-QGGKAVP 141
>SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 154 bits (373), Expect = 9e-38
Identities = 68/82 (82%), Positives = 77/82 (93%)
Frame = +2
Query: 131 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 310
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVACE++ KTGM+++CGEITS A
Sbjct: 9 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACESVAKTGMIVVCGEITSLA 68
Query: 311 NVDYQKVVRETVKHIGYDDSSK 376
NVDYQKVVR+T+K IGYDDSSK
Sbjct: 69 NVDYQKVVRDTIKQIGYDDSSK 90
>SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056)
Length = 70
Score = 84.6 bits (200), Expect = 8e-17
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +2
Query: 131 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 253
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVAC
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVAC 69
>SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0)
Length = 192
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +3
Query: 543 PVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTL 644
PV AH+L ++ +ELRRNG W RPD+K+QVT+
Sbjct: 33 PVYYAHRLVERQSELRRNGTLPWLRPDAKSQVTI 66
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2
Query: 467 EEVGAGDQGLMFGYATDETEECMP 538
E+ GAGDQGLMFGYAT+ET+ MP
Sbjct: 8 EDQGAGDQGLMFGYATNETDSLMP 31
>SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 15 RGTVWGYISGLTLNSECRRLQK*MDTRK-PTDTVMIWKMDQYFCSH 149
RG VW ++GL+ N E K + T++ PT+ V++W + + F +H
Sbjct: 416 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 461
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 15 RGTVWGYISGLTLNSECRRLQK*MDTRK-PTDTVMIWKMDQYFCSH 149
RG VW ++GL+ N E K + T++ PT+ V++W + + F +H
Sbjct: 70 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 115
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 395 CSVMLALDQQSPNIAAGVHENRNDEE--VGAGDQGLMFGYATDETEECMPLTRSACTQTQ 568
C +M + + P I G +E N E+ V D+ ET++ + LTRS +Q
Sbjct: 2022 CDIMPTISEDPPEIQFGQNEETNFEQLMVNMLDERDKLMETLRETQDSLALTRSKLNDSQ 2081
Query: 569 SENCRAQA 592
E R A
Sbjct: 2082 KEKDRLMA 2089
>SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23)
Length = 390
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 290 GEITSKANVDYQKVVRETV---KHIGYDDSSKGFDYK 391
GEITS N+D +K+ + K I YD G+DY+
Sbjct: 103 GEITSNVNIDREKLPGSNLLEFKAIAYDAKGAGYDYR 139
>SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -3
Query: 701 LQYETLCGNCCTTKQIHIRQSNLCF*IWSCPPKFSISPELCNFLIEFVCKHY 546
L +TL CC+ Q H+ SN C I + +S + EL N +++C+H+
Sbjct: 110 LNLQTLSQACCSFLQTHLDASN-CLGIRAFADLYSCT-ELENAAFKYICQHF 159
>SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20)
Length = 681
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 512 LHNRTSSPGLLPQLPRHFCSHAPQQQCLVIVGL 414
L N T+ P + PQ P H SHA + ++I G+
Sbjct: 99 LGNETARPAIAPQEPEHLVSHANKILTVIIQGM 131
>SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0)
Length = 550
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 258 VSHATFASGS*FRCASRIASLIWSHILSG 172
+S + A + FRC+ R S++W H+ +G
Sbjct: 287 ISDSDLAKVASFRCSGRFPSIVWRHMTNG 315
>SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -1
Query: 694 MKLSVGTVAPPSKYIFGKVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTGQRHAFFCLI 515
+KL++GT +KY GK+ + L P R S+A+ + CA+T R ++
Sbjct: 32 LKLNIGTRPIANKYREGKMKSTLKRELKRSRLPGRSSNAVDCVQ-CAATAAGREGGDFVL 90
Query: 514 CC--ITEHQA 491
C + +H A
Sbjct: 91 CTHDVGDHMA 100
>SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 148
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 694 MKLSVGTVAPPSKYIFGKVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTGQRHAFFCL 518
+KL++GT +KY GK+ + L P R S+A+ + A+ G+ F L
Sbjct: 75 LKLNIGTRPIANKYREGKMKSTLKRELKRSRLPGRSSNAVDCVQCAATAAGREGGDFVL 133
>SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8)
Length = 148
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 694 MKLSVGTVAPPSKYIFGKVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTGQRHAFFCL 518
+KL++GT +KY GK+ + L P R S+A+ + A+ G+ F L
Sbjct: 75 LKLNIGTRPIANKYREGKMKSTLKRELKRSRLPGRSSNAVDCVQCAATAAGREGGDFVL 133
>SB_18779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 694 MKLSVGTVAPPSKYIFGKVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTGQRHAFFCL 518
+KL++GT +KY GK+ + L P R S+A+ + A+ G+ F L
Sbjct: 7 LKLNIGTRPIANKYREGKMKSTLKRELKRSRLPGRSSNAVDFVQCAATAAGREGGDFVL 65
>SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5)
Length = 206
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 694 MKLSVGTVAPPSKYIFGKVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTGQRHAFFCL 518
+KL++GT +KY GK+ + L P R S+A+ + A+ G+ F L
Sbjct: 133 LKLNIGTRPIANKYREGKMKSTLKRELKRSRLPGRSSNAVDCVQCAATAAGREGGDFVL 191
>SB_6264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 694 MKLSVGTVAPPSKYIFGKVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTGQRHAFFCL 518
+KL++GT +KY GK+ + L P R S+A+ + A+ G+ F L
Sbjct: 7 LKLNIGTRPIANKYREGKMKSTLKRELKRSRLPGRSSNAVDCVQCAATAAGREGGDFVL 65
>SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -1
Query: 694 MKLSVGTVAPPSKYIFGKVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTGQRHAFFCL 518
+KL++GT +KY GK+ + L P R S+A+ + A+ G F L
Sbjct: 21 LKLNIGTRPIANKYREGKMKSTLKRELKRSRLPGRSSNAVDCVQCAATAAGHEGGDFVL 79
>SB_10239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -1
Query: 694 MKLSVGTVAPPSKYIFGKVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTGQRHAFFCL 518
+KL++GT +KY GK+ + L P R S A+ + A+ G+ F L
Sbjct: 7 LKLNIGTRPIANKYREGKMKSTLKRELKRSRLPGRSSDAVDCVQCAATAAGREGGDFVL 65
>SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 147
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -1
Query: 694 MKLSVGTVAPPSKYIFGKVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTGQRHAFFCL 518
+KL++GT +KY GK+ + L P R S+A+ + A+ G F L
Sbjct: 74 LKLNIGTRPIANKYREGKMKSTLKRELKRSRLPGRSSNAVDCVQCAATAAGHEGGDFVL 132
>SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1155
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 62 MPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGE-GHPDKMCDQISDAILDAHLNQDPD 238
MP G +K N + D D +L +S+ + D++C + I AHL QDPD
Sbjct: 196 MPYGGGKRGKSKKNSSTLDTGDLETWLKGRKSITRVRNHDELCAARALVIGMAHLTQDPD 255
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 62 MPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGE-GHPDKMCDQISDAILDAHLNQDPD 238
MP + G +K N + D D +L S+ + D++C + I AHL +DPD
Sbjct: 241 MPFGAGKRGKSKKNSSTLDTGDLETWLKGKRSITRVRNHDELCAARATVIGMAHLTKDPD 300
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1
Query: 631 HRLLCRICICLVVQQFPQRVSYCSSCHLQHSEKIPL 738
H+L CRI C RV C+SCH S PL
Sbjct: 1050 HQLSCRIWTC----SKRMRVVVCTSCHTTPSNATPL 1081
>SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32)
Length = 775
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 443 GVHENRNDEEVGAGDQGLMFGYATDETEECMPLTRSACTQTQSENCRAQAKWR 601
G H R D + G G GLM +++ + L + T EN + KWR
Sbjct: 267 GYHIYRKDRKKGGG--GLMAYFSSKMASRKVKLPKHMLTAKTEENWELKRKWR 317
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,072,359
Number of Sequences: 59808
Number of extensions: 644344
Number of successful extensions: 1724
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1721
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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