Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0349
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 242 2e-64
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 242 2e-64
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 239 1e-63
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 236 1e-62
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 153 2e-37
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 150 9e-37
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 149 3e-36
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 105 5e-23
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 101 6e-22
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.39
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 32 0.39
Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z93372-1|CAB07548.1| 324|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81470-1|CAB03881.1| 321|Caenorhabditis elegans Hypothetical pr... 30 2.1
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 29 4.8
Z72508-7|CAA96642.1| 336|Caenorhabditis elegans Hypothetical pr... 28 6.4
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 6.4
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 8.4
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 8.4
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 242 bits (592), Expect = 2e-64
Identities = 108/136 (79%), Positives = 124/136 (91%)
Frame = +2
Query: 137 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 316
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 317 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 496
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 497 MFGYATDETEECMPLT 544
MFGYATDETEE MPLT
Sbjct: 126 MFGYATDETEEAMPLT 141
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3
Query: 546 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGATVP 680
++L+HKLN+K+ ELRR+GE W RPDSKTQVT+ GGA VP
Sbjct: 142 LLLSHKLNRKLHELRRSGELEWVRPDSKTQVTI-EYASEGGACVP 185
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 242 bits (592), Expect = 2e-64
Identities = 108/136 (79%), Positives = 124/136 (91%)
Frame = +2
Query: 137 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 316
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 317 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 496
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 497 MFGYATDETEECMPLT 544
MFGYATDETEE MPLT
Sbjct: 126 MFGYATDETEEAMPLT 141
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3
Query: 546 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGATVP 680
++L+HKLN+K+ ELRR+GE W RPDSKTQVT+ GGA VP
Sbjct: 142 LLLSHKLNRKLHELRRSGELEWVRPDSKTQVTI-EYASEGGACVP 185
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 239 bits (586), Expect = 1e-63
Identities = 108/136 (79%), Positives = 123/136 (90%)
Frame = +2
Query: 137 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 316
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 317 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 496
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 497 MFGYATDETEECMPLT 544
MFGYATDETEE MPLT
Sbjct: 126 MFGYATDETEEAMPLT 141
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 546 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGATVP 680
++L+HKLN K+ ELRR+GE W RPDSKTQVT+ GGA VP
Sbjct: 142 LLLSHKLNYKLHELRRSGELEWVRPDSKTQVTI-EYSSEGGACVP 185
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 236 bits (577), Expect = 1e-62
Identities = 107/138 (77%), Positives = 124/138 (89%)
Frame = +2
Query: 131 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 310
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 311 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 490
VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGDQ
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 491 GLMFGYATDETEECMPLT 544
G+MFGYATDETEE MPLT
Sbjct: 123 GIMFGYATDETEETMPLT 140
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +3
Query: 546 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGATVP 680
++L+HK+N ++ +LRRNG W RPDSK+QVT+ GAT+P
Sbjct: 141 LILSHKINAELHKLRRNGTLPWVRPDSKSQVTI-EYESRHGATIP 184
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 153 bits (370), Expect = 2e-37
Identities = 67/90 (74%), Positives = 81/90 (90%)
Frame = +2
Query: 275 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 454
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 455 NRNDEEVGAGDQGLMFGYATDETEECMPLT 544
+++ ++VGAGDQG+MFGYATDETEE MPLT
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLT 90
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3
Query: 546 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGATVP 680
++L+HKLN+K+ ELRR+GE W RPDSKTQVT+ GGA VP
Sbjct: 91 LLLSHKLNRKLHELRRSGELEWVRPDSKTQVTI-EYASEGGACVP 134
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 150 bits (364), Expect = 9e-37
Identities = 67/90 (74%), Positives = 80/90 (88%)
Frame = +2
Query: 275 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 454
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 455 NRNDEEVGAGDQGLMFGYATDETEECMPLT 544
+++ +VGAGDQG+MFGYATDETEE MPLT
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLT 90
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 546 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGATVP 680
++L+HKLN K+ ELRR+GE W RPDSKTQVT+ GGA VP
Sbjct: 91 LLLSHKLNYKLHELRRSGELEWVRPDSKTQVTI-EYSSEGGACVP 134
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 149 bits (360), Expect = 3e-36
Identities = 67/81 (82%), Positives = 73/81 (90%)
Frame = +2
Query: 137 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 316
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 317 DYQKVVRETVKHIGYDDSSKG 379
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 315 WIIKKLCAKRSNILVMMIRPKAL----ITRHAV*CSH*TNNHQTLLLGCMRTEMTRKLGQ 482
W+I LC + S+ L ++I+ ITRHA+ H NNH LL T +
Sbjct: 97 WLIT-LC-QESHFLGLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEP 154
Query: 483 ETRA*CSVMQQMRQKNAC 536
E + C M M+ K C
Sbjct: 155 EIKELCLDMLLMKPKKRC 172
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 105 bits (251), Expect = 5e-23
Identities = 45/63 (71%), Positives = 55/63 (87%)
Frame = +2
Query: 356 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECM 535
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 536 PLT 544
PLT
Sbjct: 80 PLT 82
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +3
Query: 546 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGATVP 680
++L+HKLN+K+ ELRR+GE W RPDSKTQVT+ GGA +P
Sbjct: 83 LLLSHKLNRKLHELRRSGELEWVRPDSKTQVTI-EYASEGGACIP 126
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 101 bits (242), Expect = 6e-22
Identities = 45/68 (66%), Positives = 57/68 (83%), Gaps = 3/68 (4%)
Frame = +2
Query: 350 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 520
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 521 TEECMPLT 544
TEE MPLT
Sbjct: 93 TEEAMPLT 100
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = +2
Query: 137 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 316
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC KT VL+ E S
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65
Query: 317 DYQKVVRETVKHIGYDDSSKGFDYKT 394
V +++ +G D F Y T
Sbjct: 66 AGVHVDKDS-DDVGAGDQGIMFGYAT 90
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +3
Query: 546 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTLPNMYLLGGATVP 680
++L+HKLN+K+ ELRR+GE W RPDSKTQVT+ GGA +P
Sbjct: 101 LLLSHKLNRKLHELRRSGELEWVRPDSKTQVTI-EYASEGGACIP 144
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2
Query: 137 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 253
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 137 FLFTSESVGEGHPDKMCDQ 193
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 203 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 343
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 203 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 343
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 203 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 343
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.6 protein.
Length = 321
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 671 CTTKQIHIRQSNLCF*IWSCPPKFSISPELCNFL 570
C T I+ Q N C+ ++ P +FS + + CN L
Sbjct: 20 CNTGGIYNEQFNRCYQYFTAPAQFSFAEQQCNLL 53
>Z93372-1|CAB07548.1| 324|Caenorhabditis elegans Hypothetical
protein BE10.1 protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 617 SCPPKFSISPELCNFLIEFVCKHYGSTACILLSHLLHNRTSSPGLLPQLPRHFC 456
S P F SP CN + K G C+ S + + S G + +P H C
Sbjct: 178 SSTPLFDGSPGCCNEYCIQLAKANGDKVCVGQSESVTSNISYAGAIESIPIHVC 231
>Z81470-1|CAB03881.1| 321|Caenorhabditis elegans Hypothetical
protein C14A6.1 protein.
Length = 321
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 671 CTTKQIHIRQSNLCF*IWSCPPKFSISPELCNFL 570
C T I+ Q N C+ ++ P +FS + + CN L
Sbjct: 20 CNTGGIYNSQFNRCYQYFTAPAQFSFAEQQCNLL 53
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +2
Query: 575 NCRAQAKWRILVGKTRFKNTGYFAEYVFAWWCNSSHREFHTV 700
N + WR + K R YFA Y WW S + + +
Sbjct: 420 NVKLYFAWRFVAHKARLS---YFARYALQWWRTSEDQAYSLI 458
>Z72508-7|CAA96642.1| 336|Caenorhabditis elegans Hypothetical
protein F28H7.11 protein.
Length = 336
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/91 (26%), Positives = 35/91 (38%)
Frame = -3
Query: 683 CGNCCTTKQIHIRQSNLCF*IWSCPPKFSISPELCNFLIEFVCKHYGSTACILLSHLLHN 504
C C T I I F I+ F E +L+ F C + T IL +H L+
Sbjct: 54 CSLCDTFVPICIFNYRYAFTIFVADGYFETPSEFGRYLLGFRCSYITGTYAILHAHFLY- 112
Query: 503 RTSSPGLLPQLPRHFCSHAPQQQCLVIVGLV 411
R + L R+F H + +GL+
Sbjct: 113 RYMTLFCHNFLERYFLPHGIVVSVIYCLGLM 143
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 257 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 436
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 437 AAGV 448
+
Sbjct: 97 PISI 100
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 303 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 395
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 376 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 254
FGR D NF H FG HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 376 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 254
FGR D NF H FG HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,930,327
Number of Sequences: 27780
Number of extensions: 475408
Number of successful extensions: 1347
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -