Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0349
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   4.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   7.2  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   7.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.5  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 679 GTVAPPSKYIFGKVTCVFESGLAHQNSPFRLSS 581
           GTV     Y++  V  V E G    N   R+S+
Sbjct: 237 GTVKKKVNYVYRSVDQVLEDGKLKPNKKVRISN 269


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 137 ILIHLPYHNCVRWFSRIHSFLKSPAF 60
           I+ HL  H  V W+S+  +F   P +
Sbjct: 173 IVFHLETHPNVTWYSQCVTFNAFPTY 198


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 660 ANTYSAK*PVFLNLVLPTKILHF 592
           A  +SA   VFL+L++P  IL+F
Sbjct: 6   ATGFSAS-SVFLSLLIPALILYF 27


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 504 PNIKPWSPAPTSSSFLFSCTPAAMFGDCWSSASITLH 394
           PN++P S    +++      P  M  D W+S  + LH
Sbjct: 57  PNVRPISSHQIANNVTMQLLPKLMEFDDWTSV-MELH 92


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -1

Query: 709 DTNYSMKLSVGTVAPPSK---YIFGKVTCVFESGLAHQN 602
           D++Y +  ++G+   P     Y++G+++CV  S   H+N
Sbjct: 195 DSSYVIFSAMGSFFLPMLVMLYVYGRISCVIAS--RHRN 231


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 127 WISIFVHIGICWRGSSRQNVRPNKRR 204
           W+ + V +GI  +G +   VR N  R
Sbjct: 4   WLLLVVCLGIACQGITSVTVRENSPR 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,921
Number of Sequences: 438
Number of extensions: 5078
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)