Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0348
         (395 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    35   0.66 
UniRef50_Q81KB2 Cluster: Permease, putative; n=20; Bacillus cere...    32   3.5  
UniRef50_UPI0000F2C6C5 Cluster: PREDICTED: hypothetical protein;...    32   4.6  
UniRef50_UPI00015A7172 Cluster: otopetrin 1; n=1; Danio rerio|Re...    31   6.1  
UniRef50_Q7UVU8 Cluster: Chaperone protein HscC; n=4; Planctomyc...    31   6.1  
UniRef50_Q244W5 Cluster: Putative uncharacterized protein; n=1; ...    31   8.1  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 34.7 bits (76), Expect = 0.66
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 345 KKTRGGARYPIRPIVSR 395
           ++ RGGARYPIRPIVSR
Sbjct: 257 RRPRGGARYPIRPIVSR 273


>UniRef50_Q81KB2 Cluster: Permease, putative; n=20; Bacillus cereus
           group|Rep: Permease, putative - Bacillus anthracis
          Length = 651

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +1

Query: 118 NSSDPHTQLFYGTSKS*TNIIALICVYKL*TINKSSQYIL 237
           +S++ +TQL+Y   +S  N++A    ++  T+NK+  YIL
Sbjct: 367 SSAENNTQLYYAIKQSDYNVLAKALNWETLTVNKNESYIL 406


>UniRef50_UPI0000F2C6C5 Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 1513

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +1

Query: 229 YILFGNNLISSFDTVKQLSLISPVLI*NYGVMEV*R*PKKKLEG 360
           Y+   + L S  D   ++SL+S  +I +YG +EV + P +KLEG
Sbjct: 94  YVAMSHEL-SDGDDSPEISLLSGAVITSYGTVEVKKKPSEKLEG 136


>UniRef50_UPI00015A7172 Cluster: otopetrin 1; n=1; Danio rerio|Rep:
           otopetrin 1 - Danio rerio
          Length = 502

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +3

Query: 219 IKPVYFVW*QPNFFVRHSETI----IINIARPNLKLWCNGSLTLTE 344
           I  V+F+W      ++  ET+    +I+    NL LWCNG ++ TE
Sbjct: 172 ISQVHFLWFHIKDVIKKYETLKGFGVIHAVFTNLLLWCNGVMSETE 217


>UniRef50_Q7UVU8 Cluster: Chaperone protein HscC; n=4;
           Planctomycetaceae|Rep: Chaperone protein HscC -
           Rhodopirellula baltica
          Length = 587

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 125 VILIHSYFTEHQRAEPTLSH*FASINYKQSINQASIFCLV 244
           VI + +YF +HQR    L+   A +N ++ IN+ +   LV
Sbjct: 128 VITVPAYFNDHQRTATRLAGEMAGLNVRRMINEPTAAALV 167


>UniRef50_Q244W5 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 3114

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
 Frame = +1

Query: 10   NRKNIFIIAIPMKILNNTISSLTSCNCEFRSLKSLGNSSDPHTQLFYGTSKS*TNIIALI 189
            N+KNIF IA    +LNNTI   +  N       ++ +  D H Q F  TS    N I +I
Sbjct: 1958 NQKNIFNIAASQFLLNNTIIQQSQTNQNNIFAINVISIIDLHIQNF--TSS--YNQIQMI 2013

Query: 190  CVYKL*TINK----SSQY---ILFGNNLISSFDTVKQLSLISPVL 303
            CV +     +    SSQ+   I+ G+N + S   V Q+  I  ++
Sbjct: 2014 CVKQQKDKGQAQLISSQFLNNIMTGDNPLISLQNVVQMDFIFVIM 2058


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,901,752
Number of Sequences: 1657284
Number of extensions: 6206906
Number of successful extensions: 12721
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12721
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)