Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0348
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   4.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   5.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   5.9  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    20   7.7  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +3

Query: 249 PNFFVRHSETIIINIARPNLKLW 317
           P+ F+R    + IN+    +++W
Sbjct: 152 PDIFMREEVAVKINLPESRVQVW 174


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 11/58 (18%), Positives = 24/58 (41%)
 Frame = +3

Query: 222 KPVYFVW*QPNFFVRHSETIIINIARPNLKLWCNGSLTLTEKKTRGGARYPIRPIVSR 395
           K  Y  W   + F+     +I       +++W +   +L  + ++  A     P++SR
Sbjct: 200 KRAYVTWYSISVFMVPLVVLIFTYTSICIEIWQSSESSLRPRSSQKSAPGKRTPLISR 257


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +3

Query: 249 PNFFVRHSETIIINIARPNLKLW 317
           P+ F+R    + IN+    +++W
Sbjct: 94  PDIFMREEVALKINLPESRVQVW 116


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 13  RKNIFIIAIPMKILNNTISSLTSCNCEFRSLKSL 114
           + NIFI+   +   N+    +  CN    + KSL
Sbjct: 99  KSNIFILKESVDTFNDIFGWIILCNIFEAAAKSL 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,909
Number of Sequences: 336
Number of extensions: 1761
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)