BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0344 (710 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p pro... 33 0.51 AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p pro... 33 0.51 AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB... 33 0.51 X55393-1|CAA39067.1| 659|Drosophila melanogaster S59 protein pr... 32 0.67 AE014297-3018|AAF55901.3| 659|Drosophila melanogaster CG6534-PA... 32 0.67 AY089340-1|AAL90078.1| 790|Drosophila melanogaster AT15733p pro... 31 1.2 AE013599-3474|AAM71125.1| 790|Drosophila melanogaster CG3622-PA... 31 1.2 AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB... 31 1.2 AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P... 31 2.0 AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-P... 31 2.0 AY071659-1|AAL49281.1| 436|Drosophila melanogaster RE74364p pro... 29 6.2 AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula... 29 6.2 AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellula... 29 6.2 AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellula... 29 6.2 AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-P... 29 6.2 AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-P... 29 6.2 AL121806-10|CAB58085.1| 692|Drosophila melanogaster EG:BACR42I1... 29 8.2 AF541948-1|AAN34650.1| 427|Drosophila melanogaster gag protein ... 29 8.2 AE014298-161|AAF45593.2| 436|Drosophila melanogaster CG11381-PA... 29 8.2 AE014134-584|AAF51125.4| 436|Drosophila melanogaster CG33282-PA... 29 8.2 >AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p protein. Length = 510 Score = 32.7 bits (71), Expect = 0.51 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Frame = +2 Query: 41 YLAVARASIIDTDYPPA----ASVSYSSIS-TPING---KTIINPSTEVRRPINFYKTVA 196 +L+V RAS++ D PP ++ YS + P+NG T + S+ P T A Sbjct: 399 WLSVNRASVLAIDPPPCGINEVAIKYSILPILPLNGISTATTSSSSSAAATPTPIASTSA 458 Query: 197 PAPVHETFSDHNNAGNAYFSSL 262 A ++ + NN G Y +L Sbjct: 459 AASATKSAASTNNCGKLYLCNL 480 >AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p protein. Length = 358 Score = 32.7 bits (71), Expect = 0.51 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Frame = +2 Query: 41 YLAVARASIIDTDYPPA----ASVSYSSIS-TPING---KTIINPSTEVRRPINFYKTVA 196 +L+V RAS++ D PP ++ YS + P+NG T + S+ P T A Sbjct: 247 WLSVNRASVLAIDPPPCGINEVAIKYSILPILPLNGISTATTSSSSSAAATPTPIASTSA 306 Query: 197 PAPVHETFSDHNNAGNAYFSSL 262 A ++ + NN G Y +L Sbjct: 307 AASATKSAASTNNCGKLYLCNL 328 >AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB protein. Length = 680 Score = 32.7 bits (71), Expect = 0.51 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Frame = +2 Query: 41 YLAVARASIIDTDYPPA----ASVSYSSIS-TPING---KTIINPSTEVRRPINFYKTVA 196 +L+V RAS++ D PP ++ YS + P+NG T + S+ P T A Sbjct: 569 WLSVNRASVLAIDPPPCGINEVAIKYSILPILPLNGISTATTSSSSSAAATPTPIASTSA 628 Query: 197 PAPVHETFSDHNNAGNAYFSSL 262 A ++ + NN G Y +L Sbjct: 629 AASATKSAASTNNCGKLYLCNL 650 >X55393-1|CAA39067.1| 659|Drosophila melanogaster S59 protein protein. Length = 659 Score = 32.3 bits (70), Expect = 0.67 Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 2/87 (2%) Frame = +2 Query: 242 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQH-EPIGFNPHENINVHGPLVHSVSTLAAHK 418 N F + +Q++ ++ HQ++ P + +++QH P +PH + + H V + ++ Sbjct: 191 NPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHP---HPHPHPHPHPSAVFHLRAPSSSS 247 Query: 419 SIPVTFATHSI-PYSKTSYLSDTRSAP 496 + P + AT + P + + SD + +P Sbjct: 248 TAPPSPATSPLSPPTSPAMHSDQQMSP 274 >AE014297-3018|AAF55901.3| 659|Drosophila melanogaster CG6534-PA protein. Length = 659 Score = 32.3 bits (70), Expect = 0.67 Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 2/87 (2%) Frame = +2 Query: 242 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQH-EPIGFNPHENINVHGPLVHSVSTLAAHK 418 N F + +Q++ ++ HQ++ P + +++QH P +PH + + H V + ++ Sbjct: 191 NPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHP---HPHPHPHPHPSAVFHLRAPSSSS 247 Query: 419 SIPVTFATHSI-PYSKTSYLSDTRSAP 496 + P + AT + P + + SD + +P Sbjct: 248 TAPPSPATSPLSPPTSPAMHSDQQMSP 274 >AY089340-1|AAL90078.1| 790|Drosophila melanogaster AT15733p protein. Length = 790 Score = 31.5 bits (68), Expect = 1.2 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 373 SRTLGTLCLHTSCTQVYSCDLRNPFYSLFQNVLLIGHSIGPN 498 S+ +G + CT +YSC + + F++V ++ H IG N Sbjct: 107 SQVVGMATVKGMCTSIYSCTINEAKH--FESVFVVAHEIGHN 146 >AE013599-3474|AAM71125.1| 790|Drosophila melanogaster CG3622-PA, isoform A protein. Length = 790 Score = 31.5 bits (68), Expect = 1.2 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 373 SRTLGTLCLHTSCTQVYSCDLRNPFYSLFQNVLLIGHSIGPN 498 S+ +G + CT +YSC + + F++V ++ H IG N Sbjct: 107 SQVVGMATVKGMCTSIYSCTINEAKH--FESVFVVAHEIGHN 146 >AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB, isoform B protein. Length = 1091 Score = 31.5 bits (68), Expect = 1.2 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +1 Query: 373 SRTLGTLCLHTSCTQVYSCDLRNPFYSLFQNVLLIGHSIGPN 498 S+ +G + CT +YSC + + F++V ++ H IG N Sbjct: 408 SQVVGMATVKGMCTSIYSCTINEAKH--FESVFVVAHEIGHN 447 >AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA protein. Length = 2938 Score = 30.7 bits (66), Expect = 2.0 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 9/96 (9%) Frame = +2 Query: 68 IDTDYPPAAS------VSYSSISTPINGKTIINPSTEVRRPI-NFYKTVAPAPVHETFSD 226 IDT YPP S V ++ + P+ + PI NF+++ +PA VH D Sbjct: 1836 IDTIYPPRRSNGLKPNVQATAAAYPLPLLPSFEQFKRITTPITNFFRSSSPAGVHPHAHD 1895 Query: 227 HNNAGNAYFSSLHKQNLD-YYNH-QNYDTPVYLNTY 328 H + + + + D +H QN PV L+T+ Sbjct: 1896 HTSTTPSSLVGYVRDHQDKSCSHCQNGSQPVVLSTH 1931 >AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-PA protein. Length = 2465 Score = 30.7 bits (66), Expect = 2.0 Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 1/104 (0%) Frame = +2 Query: 86 PAASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLH 265 P S S ++P G NPS Y + +P P+++ + + + Y SS+ Sbjct: 1404 PNVSTPDMSGTSPYGGGNSYNPSGSEASKTPAYSSTSPLPIYDQYKQPRSQESDYNSSMS 1463 Query: 266 KQNLDYYN-HQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHS 394 + ++ +Q + Y Q + +P+ N + + HS Sbjct: 1464 PSTPNPHSPYQQPQSSPYTTPQQSQSTHPSPYHNQSPYHQQQHS 1507 >AY071659-1|AAL49281.1| 436|Drosophila melanogaster RE74364p protein. Length = 436 Score = 29.1 bits (62), Expect = 6.2 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = +2 Query: 164 RRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNY 301 ++ ++ ++T HE+F + N NAY Q+ +NHQ + Sbjct: 96 QKEVDSWQTALSQQQHESFGNQQNHQNAYSEGPVYQHYQGFNHQQH 141 >AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular matrix protein papilin3 protein. Length = 2898 Score = 29.1 bits (62), Expect = 6.2 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 326 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 490 YQ +P+GF + + GP+ S + L K+I + + +SIP S + DT + Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341 >AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellular matrix protein papilin2 protein. Length = 2776 Score = 29.1 bits (62), Expect = 6.2 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 326 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 490 YQ +P+GF + + GP+ S + L K+I + + +SIP S + DT + Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341 >AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellular matrix protein papilinprotein. Length = 2174 Score = 29.1 bits (62), Expect = 6.2 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 326 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 490 YQ +P+GF + + GP+ S + L K+I + + +SIP S + DT + Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341 >AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-PA, isoform A protein. Length = 2894 Score = 29.1 bits (62), Expect = 6.2 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 326 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 490 YQ +P+GF + + GP+ S + L K+I + + +SIP S + DT + Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341 >AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-PB, isoform B protein. Length = 2772 Score = 29.1 bits (62), Expect = 6.2 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 326 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 490 YQ +P+GF + + GP+ S + L K+I + + +SIP S + DT + Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341 >AL121806-10|CAB58085.1| 692|Drosophila melanogaster EG:BACR42I17.9 protein. Length = 692 Score = 28.7 bits (61), Expect = 8.2 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = +2 Query: 164 RRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNY 301 ++ ++ ++T HE+F + N NAY Q+ +NHQ + Sbjct: 96 QKEVDSWQTALSQQQHESFGNQQNHQNAYNEGPVYQHYQGFNHQQH 141 >AF541948-1|AAN34650.1| 427|Drosophila melanogaster gag protein protein. Length = 427 Score = 28.7 bits (61), Expect = 8.2 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = +2 Query: 254 SSLHKQNLDYYNHQNYDTPVYLNTYQ--HEPIGFNP 355 ++ H+Q +YYNH P Y YQ +PI + P Sbjct: 214 NATHRQTTNYYNHTTPFQPSYNAMYQPIRQPISYIP 249 >AE014298-161|AAF45593.2| 436|Drosophila melanogaster CG11381-PA protein. Length = 436 Score = 28.7 bits (61), Expect = 8.2 Identities = 12/46 (26%), Positives = 23/46 (50%) Frame = +2 Query: 164 RRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNY 301 ++ ++ ++T HE+F + N NAY Q+ +NHQ + Sbjct: 96 QKEVDSWQTALSQQQHESFGNQQNHQNAYNEGPVYQHYQGFNHQQH 141 >AE014134-584|AAF51125.4| 436|Drosophila melanogaster CG33282-PA protein. Length = 436 Score = 28.7 bits (61), Expect = 8.2 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +3 Query: 510 FLLKVANLLDYQHIPLILLCRICHQNQVPYI-LRFLVL 620 +L K+ +L D+ +PL+L+ IC+ + I + FLVL Sbjct: 326 YLAKIYDLSDFNWLPLVLMIIICYVANIGLIGIFFLVL 363 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 30,755,396 Number of Sequences: 53049 Number of extensions: 665563 Number of successful extensions: 2358 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2284 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2357 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3149551053 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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