SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0344
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p pro...    33   0.51 
AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p pro...    33   0.51 
AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB...    33   0.51 
X55393-1|CAA39067.1|  659|Drosophila melanogaster S59 protein pr...    32   0.67 
AE014297-3018|AAF55901.3|  659|Drosophila melanogaster CG6534-PA...    32   0.67 
AY089340-1|AAL90078.1|  790|Drosophila melanogaster AT15733p pro...    31   1.2  
AE013599-3474|AAM71125.1|  790|Drosophila melanogaster CG3622-PA...    31   1.2  
AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB...    31   1.2  
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P...    31   2.0  
AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-P...    31   2.0  
AY071659-1|AAL49281.1|  436|Drosophila melanogaster RE74364p pro...    29   6.2  
AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula...    29   6.2  
AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellula...    29   6.2  
AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellula...    29   6.2  
AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-P...    29   6.2  
AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-P...    29   6.2  
AL121806-10|CAB58085.1|  692|Drosophila melanogaster EG:BACR42I1...    29   8.2  
AF541948-1|AAN34650.1|  427|Drosophila melanogaster gag protein ...    29   8.2  
AE014298-161|AAF45593.2|  436|Drosophila melanogaster CG11381-PA...    29   8.2  
AE014134-584|AAF51125.4|  436|Drosophila melanogaster CG33282-PA...    29   8.2  

>AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p
           protein.
          Length = 510

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
 Frame = +2

Query: 41  YLAVARASIIDTDYPPA----ASVSYSSIS-TPING---KTIINPSTEVRRPINFYKTVA 196
           +L+V RAS++  D PP      ++ YS +   P+NG    T  + S+    P     T A
Sbjct: 399 WLSVNRASVLAIDPPPCGINEVAIKYSILPILPLNGISTATTSSSSSAAATPTPIASTSA 458

Query: 197 PAPVHETFSDHNNAGNAYFSSL 262
            A   ++ +  NN G  Y  +L
Sbjct: 459 AASATKSAASTNNCGKLYLCNL 480


>AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p
           protein.
          Length = 358

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
 Frame = +2

Query: 41  YLAVARASIIDTDYPPA----ASVSYSSIS-TPING---KTIINPSTEVRRPINFYKTVA 196
           +L+V RAS++  D PP      ++ YS +   P+NG    T  + S+    P     T A
Sbjct: 247 WLSVNRASVLAIDPPPCGINEVAIKYSILPILPLNGISTATTSSSSSAAATPTPIASTSA 306

Query: 197 PAPVHETFSDHNNAGNAYFSSL 262
            A   ++ +  NN G  Y  +L
Sbjct: 307 AASATKSAASTNNCGKLYLCNL 328


>AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB
           protein.
          Length = 680

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
 Frame = +2

Query: 41  YLAVARASIIDTDYPPA----ASVSYSSIS-TPING---KTIINPSTEVRRPINFYKTVA 196
           +L+V RAS++  D PP      ++ YS +   P+NG    T  + S+    P     T A
Sbjct: 569 WLSVNRASVLAIDPPPCGINEVAIKYSILPILPLNGISTATTSSSSSAAATPTPIASTSA 628

Query: 197 PAPVHETFSDHNNAGNAYFSSL 262
            A   ++ +  NN G  Y  +L
Sbjct: 629 AASATKSAASTNNCGKLYLCNL 650


>X55393-1|CAA39067.1|  659|Drosophila melanogaster S59 protein
           protein.
          Length = 659

 Score = 32.3 bits (70), Expect = 0.67
 Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
 Frame = +2

Query: 242 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQH-EPIGFNPHENINVHGPLVHSVSTLAAHK 418
           N  F +  +Q++ ++ HQ++  P + +++QH  P   +PH + + H   V  +   ++  
Sbjct: 191 NPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHP---HPHPHPHPHPSAVFHLRAPSSSS 247

Query: 419 SIPVTFATHSI-PYSKTSYLSDTRSAP 496
           + P + AT  + P +  +  SD + +P
Sbjct: 248 TAPPSPATSPLSPPTSPAMHSDQQMSP 274


>AE014297-3018|AAF55901.3|  659|Drosophila melanogaster CG6534-PA
           protein.
          Length = 659

 Score = 32.3 bits (70), Expect = 0.67
 Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
 Frame = +2

Query: 242 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQH-EPIGFNPHENINVHGPLVHSVSTLAAHK 418
           N  F +  +Q++ ++ HQ++  P + +++QH  P   +PH + + H   V  +   ++  
Sbjct: 191 NPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHP---HPHPHPHPHPSAVFHLRAPSSSS 247

Query: 419 SIPVTFATHSI-PYSKTSYLSDTRSAP 496
           + P + AT  + P +  +  SD + +P
Sbjct: 248 TAPPSPATSPLSPPTSPAMHSDQQMSP 274


>AY089340-1|AAL90078.1|  790|Drosophila melanogaster AT15733p
           protein.
          Length = 790

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 373 SRTLGTLCLHTSCTQVYSCDLRNPFYSLFQNVLLIGHSIGPN 498
           S+ +G   +   CT +YSC +    +  F++V ++ H IG N
Sbjct: 107 SQVVGMATVKGMCTSIYSCTINEAKH--FESVFVVAHEIGHN 146


>AE013599-3474|AAM71125.1|  790|Drosophila melanogaster CG3622-PA,
           isoform A protein.
          Length = 790

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 373 SRTLGTLCLHTSCTQVYSCDLRNPFYSLFQNVLLIGHSIGPN 498
           S+ +G   +   CT +YSC +    +  F++V ++ H IG N
Sbjct: 107 SQVVGMATVKGMCTSIYSCTINEAKH--FESVFVVAHEIGHN 146


>AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB,
           isoform B protein.
          Length = 1091

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 373 SRTLGTLCLHTSCTQVYSCDLRNPFYSLFQNVLLIGHSIGPN 498
           S+ +G   +   CT +YSC +    +  F++V ++ H IG N
Sbjct: 408 SQVVGMATVKGMCTSIYSCTINEAKH--FESVFVVAHEIGHN 447


>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
            protein.
          Length = 2938

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
 Frame = +2

Query: 68   IDTDYPPAAS------VSYSSISTPINGKTIINPSTEVRRPI-NFYKTVAPAPVHETFSD 226
            IDT YPP  S      V  ++ + P+           +  PI NF+++ +PA VH    D
Sbjct: 1836 IDTIYPPRRSNGLKPNVQATAAAYPLPLLPSFEQFKRITTPITNFFRSSSPAGVHPHAHD 1895

Query: 227  HNNAGNAYFSSLHKQNLD-YYNH-QNYDTPVYLNTY 328
            H +   +      + + D   +H QN   PV L+T+
Sbjct: 1896 HTSTTPSSLVGYVRDHQDKSCSHCQNGSQPVVLSTH 1931


>AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-PA
            protein.
          Length = 2465

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
 Frame = +2

Query: 86   PAASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLH 265
            P  S    S ++P  G    NPS         Y + +P P+++ +    +  + Y SS+ 
Sbjct: 1404 PNVSTPDMSGTSPYGGGNSYNPSGSEASKTPAYSSTSPLPIYDQYKQPRSQESDYNSSMS 1463

Query: 266  KQNLDYYN-HQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHS 394
                + ++ +Q   +  Y    Q +    +P+ N + +    HS
Sbjct: 1464 PSTPNPHSPYQQPQSSPYTTPQQSQSTHPSPYHNQSPYHQQQHS 1507


>AY071659-1|AAL49281.1|  436|Drosophila melanogaster RE74364p
           protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 164 RRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNY 301
           ++ ++ ++T      HE+F +  N  NAY      Q+   +NHQ +
Sbjct: 96  QKEVDSWQTALSQQQHESFGNQQNHQNAYSEGPVYQHYQGFNHQQH 141


>AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular
           matrix protein papilin3 protein.
          Length = 2898

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 326 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 490
           YQ +P+GF   + +   GP+  S  +  L   K+I + +  +SIP S +    DT +
Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341


>AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellular
           matrix protein papilin2 protein.
          Length = 2776

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 326 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 490
           YQ +P+GF   + +   GP+  S  +  L   K+I + +  +SIP S +    DT +
Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341


>AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellular
           matrix protein papilinprotein.
          Length = 2174

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 326 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 490
           YQ +P+GF   + +   GP+  S  +  L   K+I + +  +SIP S +    DT +
Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341


>AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-PA,
           isoform A protein.
          Length = 2894

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 326 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 490
           YQ +P+GF   + +   GP+  S  +  L   K+I + +  +SIP S +    DT +
Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341


>AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-PB,
           isoform B protein.
          Length = 2772

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 326 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 490
           YQ +P+GF   + +   GP+  S  +  L   K+I + +  +SIP S +    DT +
Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341


>AL121806-10|CAB58085.1|  692|Drosophila melanogaster EG:BACR42I17.9
           protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 164 RRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNY 301
           ++ ++ ++T      HE+F +  N  NAY      Q+   +NHQ +
Sbjct: 96  QKEVDSWQTALSQQQHESFGNQQNHQNAYNEGPVYQHYQGFNHQQH 141


>AF541948-1|AAN34650.1|  427|Drosophila melanogaster gag protein
           protein.
          Length = 427

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 254 SSLHKQNLDYYNHQNYDTPVYLNTYQ--HEPIGFNP 355
           ++ H+Q  +YYNH     P Y   YQ   +PI + P
Sbjct: 214 NATHRQTTNYYNHTTPFQPSYNAMYQPIRQPISYIP 249


>AE014298-161|AAF45593.2|  436|Drosophila melanogaster CG11381-PA
           protein.
          Length = 436

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 164 RRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNY 301
           ++ ++ ++T      HE+F +  N  NAY      Q+   +NHQ +
Sbjct: 96  QKEVDSWQTALSQQQHESFGNQQNHQNAYNEGPVYQHYQGFNHQQH 141


>AE014134-584|AAF51125.4|  436|Drosophila melanogaster CG33282-PA
           protein.
          Length = 436

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 510 FLLKVANLLDYQHIPLILLCRICHQNQVPYI-LRFLVL 620
           +L K+ +L D+  +PL+L+  IC+   +  I + FLVL
Sbjct: 326 YLAKIYDLSDFNWLPLVLMIIICYVANIGLIGIFFLVL 363


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,755,396
Number of Sequences: 53049
Number of extensions: 665563
Number of successful extensions: 2358
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2357
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -