Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0343
         (636 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6H9S1 Cluster: Putative avirulence protein; n=3; root|...    37   0.47 
UniRef50_Q7PE79 Cluster: ENSANGP00000023655; n=4; Culicidae|Rep:...    36   0.82 
UniRef50_A4TXJ4 Cluster: Microcystin dependent protein; n=1; Mag...    36   1.1  
UniRef50_O16844 Cluster: Kinesin-related protein; n=11; Sophopho...    35   1.9  
UniRef50_UPI0000EBD6DE Cluster: PREDICTED: hypothetical protein;...    34   3.3  
UniRef50_Q5BZE9 Cluster: SJCHGC08917 protein; n=1; Schistosoma j...    33   5.8  

>UniRef50_Q6H9S1 Cluster: Putative avirulence protein; n=3;
           root|Rep: Putative avirulence protein - Phage BP-4795
          Length = 418

 Score = 36.7 bits (81), Expect = 0.47
 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = -1

Query: 633 GSSSDVLCVFRFLFTLKGQA-AAPGLSLSE-CRSSALSPLVGPYFFETGSPSPLRYESGL 460
           GSSSD     R+     G+  AAPGLS +E C+  A+S L   YF   GS  P    +G+
Sbjct: 297 GSSSDATLATRYAAEHFGKTWAAPGLSQAEGCK--AISDLSHHYFRAEGSSPPQSMATGI 354

Query: 459 MLAASSEEFEDKSDDRSSIFTVSW 388
                    E+K  +   IFT S+
Sbjct: 355 NKVRYDAGMEEKYVNTLDIFTHSY 378


>UniRef50_Q7PE79 Cluster: ENSANGP00000023655; n=4; Culicidae|Rep:
           ENSANGP00000023655 - Anopheles gambiae str. PEST
          Length = 252

 Score = 35.9 bits (79), Expect = 0.82
 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -2

Query: 611 AFFVFYLLSKDRLLLLGYPCQSADLLLFPLS--LGHTFSKRAHLLHCGTSPG 462
           +FFV YLL  +RL  LG  C SA LL+ PLS  L H + K+   L  G   G
Sbjct: 27  SFFV-YLLYSNRLYDLGKCCSSAVLLILPLSEILKHFYVKQMFQLETGLKSG 77


>UniRef50_A4TXJ4 Cluster: Microcystin dependent protein; n=1;
           Magnetospirillum gryphiswaldense|Rep: Microcystin
           dependent protein - Magnetospirillum gryphiswaldense
          Length = 241

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = -1

Query: 615 LCVFRFLFTLKGQAAAPGLSLSECRSSALSPLVGPYFFETGSPS 484
           +C F F +  +G   A G S++  + +AL  LVGPY+  TG+P+
Sbjct: 40  VCYFAFNWCPRGFLPADGTSVTTQQYTALYSLVGPYYGGTGNPN 83


>UniRef50_O16844 Cluster: Kinesin-related protein; n=11;
           Sophophora|Rep: Kinesin-related protein - Drosophila
           melanogaster (Fruit fly)
          Length = 1201

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 18/65 (27%), Positives = 34/65 (52%)
 Frame = +3

Query: 435 ILQTTLPTSARTRTAMEKVSPFRKSMAQREGKEQKIGTLTGIAQEQQPVL*E*IKNEKRK 614
           I Q  L  +A T    +     RK +A+ EGK++++  +    Q +Q ++ E +KN   +
Sbjct: 643 IRQAALAAAAATAPIEQLQKKLRKLVAEIEGKQRQLREIEETIQVKQNIIAELVKNSDTR 702

Query: 615 AHRKK 629
           +H K+
Sbjct: 703 SHAKQ 707


>UniRef50_UPI0000EBD6DE Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 229

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 453 PTSARTRTAMEKVSPFRKSMAQREGKEQKIGTLT 554
           P   RTR A    SP RK + +R G  QK+ +LT
Sbjct: 188 PPRGRTRAASVSTSPSRKQIPERNGNNQKVPSLT 221


>UniRef50_Q5BZE9 Cluster: SJCHGC08917 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC08917 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 256

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -1

Query: 363 SLLPRRDPMHTARRRRPDNIEQNPHVPNLRDPCICADTRDIL---IKTKNSEIYLSVGLN 193
           S+LP  DP+   R R  D++   P V  L DP +  D  DI    IK  + EI LS+   
Sbjct: 108 SVLPSCDPIPEKRARIEDSLSCAPSVVTLTDPVVNND-NDIYEEGIKNNSEEIVLSIPYE 166

Query: 192 R 190
           R
Sbjct: 167 R 167


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,900,299
Number of Sequences: 1657284
Number of extensions: 13078110
Number of successful extensions: 33427
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33413
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)