Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0343
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.7  
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    21   6.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.6  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 324 RRRPDNIEQNPHVPNLRDPC 265
           + RP       H  NL+DPC
Sbjct: 252 KMRPKRQSSRRHRKNLKDPC 271


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 296 TRMFLIYVILAFAQI 252
           +RMFLI V++AF  +
Sbjct: 2   SRMFLIVVLIAFVGV 16


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -3

Query: 595 IYSQRTGCCSW 563
           +Y+ + G CSW
Sbjct: 143 VYNDKAGICSW 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,416
Number of Sequences: 336
Number of extensions: 3225
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)