Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0342
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   6.6  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +3

Query: 516 QMNVFGRQLGVTPAAMGIVTAILPLLWAT 602
           +MN F   L +   ++G++  +  ++W T
Sbjct: 58  RMNYFITHLALADLSVGLINVLTDIIWKT 86


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = +3

Query: 48  FQMLLLLINKSENPRLITHHNFITLNHVLIEMLDCSVKNTLHNRAATLFLSQHSLM 215
           + +L  ++  SE P LI       +  + +E L   V N    +  T+F    S++
Sbjct: 456 YALLTAIVIFSERPALIEGWKVEKIQEIYLEALRAYVDNRRKPKPGTIFAKLLSVL 511


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 516 QMNVFGRQLGVTPAAMGIVTAILPLLW 596
           +MN F  QL +   A+G+++    + W
Sbjct: 80  RMNFFICQLAIADLAVGLISVSTDIAW 106


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 475 CAFTGSKLLLIFILCKFH 422
           CAF    + L+F+LC +H
Sbjct: 151 CAFIIFTVHLLFLLCIYH 168


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 492 RRKRRNAPLQAASFC*SSFYAN 427
           RRKRRN   QA+      FY++
Sbjct: 231 RRKRRNFSKQASEILNEYFYSH 252


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 233 FLFNCIH*TML 201
           FL+NC H T+L
Sbjct: 144 FLYNCFHSTLL 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,490
Number of Sequences: 336
Number of extensions: 3140
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)