Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0338
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    24   1.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   4.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   4.4  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   7.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   7.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   7.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   7.8  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = -3

Query: 422 TSATLR*TFKCARHDGTNNNKISHFMVPASS*FNL 318
           ++ATL  TF+C   +   +++++ F+V   +  N+
Sbjct: 363 SAATLPITFRCLEENNKIDSRVTRFVVAVGATVNM 397


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -1

Query: 496 IMG*PKFDLYNFRWSKSCTHPTIASLQQH*GKHSNAPGTMAPTITKLATS 347
           I G P+  L N  +  +      ASL      H + PG  A TIT + T+
Sbjct: 616 IYGIPRSTLRNKVYKLAMERERDASLSST-HSHPHEPGAPATTITTITTT 664


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 434 WVSTGFTPSKII*IKFWLSHDAFRYHADI 520
           +V    TPS+ + + FW+   AF++ + I
Sbjct: 111 YVPADRTPSQSLPVIFWIHGGAFQFGSGI 139


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 434 WVSTGFTPSKII*IKFWLSHDAFRYHADI 520
           +V    TPS+ + + FW+   AF++ + I
Sbjct: 111 YVPADRTPSQSLPVIFWIHGGAFQFGSGI 139


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 340 GTMKWLILLLLVPSCLAHLNVY 405
           GT+ +L+   L+ SC   LN++
Sbjct: 172 GTVNYLMRRHLILSCQGRLNIF 193


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 340 GTMKWLILLLLVPSCLAHLNVY 405
           GT+ +L+   L+ SC   LN++
Sbjct: 172 GTVNYLMRRHLILSCQGRLNIF 193


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 340 GTMKWLILLLLVPSCLAHLNVY 405
           GT+ +L+   L+ SC   LN++
Sbjct: 223 GTVNYLMRRHLILSCQGRLNIF 244


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 340 GTMKWLILLLLVPSCLAHLNVY 405
           GT+ +L+   L+ SC   LN++
Sbjct: 172 GTVNYLMRRHLILSCQGRLNIF 193


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 395 KCARHDGTNNNKISH 351
           +CA  D  NNN+  H
Sbjct: 582 RCANSDNQNNNQNKH 596


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,852
Number of Sequences: 438
Number of extensions: 3837
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)