Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0337
(335 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 25 0.77
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 24 1.3
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 2.3
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 2.3
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 3.1
DQ974171-1|ABJ52811.1| 403|Anopheles gambiae serpin 14 protein. 23 3.1
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 3.1
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 4.1
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 22 5.4
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 22 5.4
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 22 5.4
CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein ... 21 9.4
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 25.0 bits (52), Expect = 0.77
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 127 LKLIHVL*NLSISYTSGYRLEDDQLQGL 210
LK ++V+ L+ SY+ Y E+D L+ +
Sbjct: 2044 LKKVYVINTLNTSYSIDYEYENDNLRSI 2071
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 24.2 bits (50), Expect = 1.3
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -2
Query: 244 LRANKSLVPAAVTLGVGH--LRACNP 173
LR N + PAAV LG+GH L+ NP
Sbjct: 189 LRTNPNC-PAAVRLGMGHCFLKLSNP 213
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 2.3
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 146 CETCRYHILRVTGSKMTNSKGYRRGHQGLVRSQVPHTWNYSALHVHESVQSWRHCRHHRQ 325
C T + G M N G + + L+ S V Y+A HE+ ++ + CR Q
Sbjct: 771 CTTKALRTAKALGCLMRNHSGPKCAKRRLLASVVDSILRYAAPVWHEATKN-QECRRMLQ 829
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 334 TAPLPMMSTMSPTLYTFMY 278
TA +P S + PTL+ MY
Sbjct: 607 TAGVPQGSVLGPTLWNLMY 625
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 334 TAPLPMMSTMSPTLYTFMY 278
TA +P S + PTL+ MY
Sbjct: 683 TAGVPQGSILGPTLWNIMY 701
>DQ974171-1|ABJ52811.1| 403|Anopheles gambiae serpin 14 protein.
Length = 403
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 201 PRVTAAGTRDLFARRFRTHGTIPLFTYMKVYKVGD 305
P + RD AR FRT L+ ++K GD
Sbjct: 193 PFASGFDARDTIARDFRTGWIDKLYQTTTMFKEGD 227
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 334 TAPLPMMSTMSPTLYTFMY 278
TA +P S + PTL+ MY
Sbjct: 629 TAGVPQGSILGPTLWNIMY 647
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 245 VPHTWNYSALHVHESVQS 298
V +TWNY+A V + V S
Sbjct: 282 VENTWNYTAADVADLVDS 299
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 275 EERNSSMCAEPASEQVPGARGGNP 204
++ + + A PA+ +VPGA NP
Sbjct: 260 DKDDPAAAAAPATAEVPGAVVANP 283
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 334 TAPLPMMSTMSPTLYTFMY 278
T+ +P S + PTL+ MY
Sbjct: 602 TSGVPQGSVLGPTLWNLMY 620
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 22.2 bits (45), Expect = 5.4
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +2
Query: 167 ILRVTGSKMTNSKGYRRGHQGLVRSQVPHTWNYSALHVHESVQSWRHCR 313
I+ M N G R L+ + T Y+A HE++ + CR
Sbjct: 833 IVHAVNRLMPNLHGPRTSMSRLLANVADSTMRYAAPVWHEAIGNQECCR 881
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 334 TAPLPMMSTMSPTLYTFMY 278
+A +P S + PTL+ MY
Sbjct: 698 SAGVPQGSILGPTLWNMMY 716
>CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein
protein.
Length = 227
Score = 21.4 bits (43), Expect = 9.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -2
Query: 328 PLPMMSTMSPTLYTFMYVKSGIVPCVRNLRANKSLVP 218
PL P Y + S IV C RN+ ++ VP
Sbjct: 99 PLFQQGFCQPGEYVDLARPSMIVKCTRNVCTGRNEVP 135
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,032
Number of Sequences: 2352
Number of extensions: 6196
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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