Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0336
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.26 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   1.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   1.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   1.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   4.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 317 GSATSAAFK-VKKGGRYQMQVELCNSDGCSSSEGVE 421
           G  T++ F+ VK G  Y +    C+S GCS     E
Sbjct: 327 GDKTNSVFEHVKLGSLYHISFMACSSAGCSQKVAEE 362


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 526 LLRRMG-CVS*KVSLWTAFPVPNLTHLLYGFISDL 627
           LL++MG   +   S ++ F + N+T  +YGF S++
Sbjct: 237 LLQKMGNAYARTYSTYSLFMMANITVAVYGFTSEI 271


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 526 LLRRMG-CVS*KVSLWTAFPVPNLTHLLYGFISDL 627
           LL++MG   +   S ++ F + N+T  +YGF S++
Sbjct: 237 LLQKMGNAYARTYSTYSLFMMANITVAVYGFTSEI 271


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 526 LLRRMG-CVS*KVSLWTAFPVPNLTHLLYGFISDL 627
           LL++MG   +   S ++ F + N+T  +YGF S++
Sbjct: 237 LLQKMGNAYARTYSTYSLFMMANITVAVYGFTSEI 271


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 218 DAADVSVNWNVWTGDAA 268
           D +   V WN W G+A+
Sbjct: 104 DESKCDVFWNCWNGEAS 120


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 218 DAADVSVNWNVWTGDAA 268
           D +   V WN W G+A+
Sbjct: 104 DESKCDVFWNCWNGEAS 120


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 285 RTLDLSAASPVHTFQLTETSAASFLVTS 202
           RTLD  AAS +++F    T + SF  T+
Sbjct: 229 RTLDGMAASKLNSFHWHITDSHSFPFTA 256


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 456 GLSIILLVRKINPSSRLREKWWALTSSNGVCIL 554
           GL+   LVR  N     +  WW LT  N + +L
Sbjct: 31  GLAPYSLVRVENGKKVFKFAWWPLT-RNALLVL 62


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 456 GLSIILLVRKINPSSRLREKWWALTSSNGVCIL 554
           GL+   LVR  N     +  WW LT  N + +L
Sbjct: 31  GLAPYSLVRVENGKKVFKFAWWPLT-RNALLVL 62


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 276 PESCSMGRKSGAVPAAPHQPLS 341
           P S +    SGAV A+P  P++
Sbjct: 103 PGSSTTSATSGAVMASPPMPIT 124


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = -2

Query: 459 GLKWLPSVSATTISTPSLELHPSELQSSTCIWYLPPFFTLKAADVALPAP 310
           GL  L S     + +PS  +    +  ++      P    +A DV LP P
Sbjct: 689 GLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPP 738


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = -2

Query: 459 GLKWLPSVSATTISTPSLELHPSELQSSTCIWYLPPFFTLKAADVALPAP 310
           GL  L S     + +PS  +    +  ++      P    +A DV LP P
Sbjct: 581 GLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPP 630


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 320 SATSAAFKVKKGGRYQMQVELC 385
           SA S   K KKG   + Q ELC
Sbjct: 167 SADSCDSKKKKGPTPRQQEELC 188


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 324 ALPAPLQTSFPSSRTLDLSAASPVH 250
           A P P  TS  S  ++  +A++P+H
Sbjct: 32  AAPPPATTSSGSPASVASNASAPLH 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,594
Number of Sequences: 336
Number of extensions: 3159
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)