BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0336
(709 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-7|CAD27929.1| 555|Anopheles gambiae putative glycerol ... 26 1.3
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 25 1.8
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 23 7.1
AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotens... 23 9.4
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 23 9.4
AJ297933-1|CAC35453.2| 392|Anopheles gambiae Ag9 protein protein. 23 9.4
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 23 9.4
>AJ439353-7|CAD27929.1| 555|Anopheles gambiae putative glycerol
kinase protein.
Length = 555
Score = 25.8 bits (54), Expect = 1.3
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 520 HHFSRSLLEGFIFLTNRIIERPQM-ATISIGYYDFDALARAASV*VAELDLHLVSSTLLH 344
HHF R+ LE F T IIE + I++ D + + S+ + +L L +L
Sbjct: 389 HHFVRAALEAVCFQTRDIIEAMKKDCGINLNKLHTDGIMASNSL-LMQLQADLSGIPVLR 447
Query: 343 FESG*CGAAGTA 308
E A GTA
Sbjct: 448 TEVHEPAALGTA 459
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 25.4 bits (53), Expect = 1.8
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -2
Query: 459 GLKWLPSVSATTIST-PSLELHPSELQSSTCIWY-LPPFFTL 340
G W + + +T+ T L+L+P+ S T WY L P + L
Sbjct: 469 GSAWSVNYNTSTVMTNKELQLNPTTDYSETVYWYGLDPLWML 510
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 23.4 bits (48), Expect = 7.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 208 HELVVSCGRLVDFDDR 161
H LV + GRL+DF DR
Sbjct: 301 HVLVATPGRLLDFIDR 316
>AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotensin
converting enzymeprecursor protein.
Length = 339
Score = 23.0 bits (47), Expect = 9.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 187 GRLVDFDDRERALAPAEVRFPWRAAGADGERGHRENERY 71
GR D+D R+R +P R G G ++ ERY
Sbjct: 103 GRANDYDRRDRQDSPYSYNDRNRYGGDRGYDRNQNRERY 141
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 23.0 bits (47), Expect = 9.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 311 GAGSATSAAFKVKKGGRYQMQVELCN 388
GAG AT + K RY Q E C+
Sbjct: 172 GAGCATQPCSALLKACRYAKQPERCS 197
>AJ297933-1|CAC35453.2| 392|Anopheles gambiae Ag9 protein protein.
Length = 392
Score = 23.0 bits (47), Expect = 9.4
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 205 ELVVSCGRLVDFDDR 161
ELVV G+L+ FDDR
Sbjct: 194 ELVVFNGKLLTFDDR 208
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 23.0 bits (47), Expect = 9.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 444 PSVSATTISTPSLELH 397
PSV T +TPSL LH
Sbjct: 171 PSVIDVTFATPSLVLH 186
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,210
Number of Sequences: 2352
Number of extensions: 13589
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -