Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0332
(535 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1) 42 4e-04
SB_40765| Best HMM Match : DX (HMM E-Value=1.4) 41 7e-04
SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8) 40 0.001
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8) 40 0.001
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072) 40 0.001
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6) 40 0.001
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0) 40 0.001
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0) 40 0.001
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 40 0.002
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 39 0.002
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 39 0.002
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 39 0.003
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3) 39 0.003
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4) 39 0.003
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 38 0.005
SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5) 38 0.005
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 38 0.005
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5) 38 0.007
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33) 38 0.007
SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082) 37 0.012
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 37 0.012
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 37 0.012
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 36 0.016
SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 36 0.027
SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4) 36 0.027
SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5) 35 0.036
SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2) 35 0.048
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5) 34 0.084
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.084
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 33 0.19
SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7) 31 0.45
SB_54075| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_48543| Best HMM Match : Exo_endo_phos (HMM E-Value=7.8e-06) 30 1.0
SB_43430| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_42334| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_36028| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_24690| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 30 1.0
SB_9140| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_4338| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_2173| Best HMM Match : DUF1401 (HMM E-Value=6.3) 30 1.0
SB_50776| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_41244| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_31163| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_7536| Best HMM Match : DUF1401 (HMM E-Value=7.9) 30 1.0
SB_2999| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 30 1.0
SB_2489| Best HMM Match : RVT_1 (HMM E-Value=0.02) 30 1.0
SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_27890| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_18718| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_8907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_8123| Best HMM Match : Tfb2 (HMM E-Value=0.00019) 29 2.4
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 29 3.2
SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11) 29 3.2
SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16) 28 4.2
SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2) 28 4.2
SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 28 4.2
SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9) 28 4.2
SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 4.2
SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_47354| Best HMM Match : RVT_1 (HMM E-Value=2e-07) 28 5.5
SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.5
SB_53803| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_36259| Best HMM Match : PHD (HMM E-Value=5.3e-05) 27 7.3
SB_21791| Best HMM Match : V-set (HMM E-Value=1.4) 27 7.3
SB_40696| Best HMM Match : DUF1096 (HMM E-Value=5.5) 27 7.3
SB_25515| Best HMM Match : Complex1_LYR (HMM E-Value=9.6) 27 7.3
SB_51388| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.6
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 27 9.6
SB_42286| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21) 27 9.6
SB_26191| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMI-PASRFYHRTARHRSRVHPYYLEPLRSSTV 291
PL RRD L +L+++ +G+ S L ++ PA+ Y+ H + ++ +
Sbjct: 192 PLEYRRDITDLVLLFKIKNGDVSISLASLLSPATSRYNTRNYHSNNYRLFFTH----NQN 247
Query: 292 RFQRSFLPRTIRLWNELPS 348
++ S+ PRT++LWN LPS
Sbjct: 248 YYRNSYFPRTVKLWNSLPS 266
>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMI-PASRFYHRTARHRSRVHPYYLEPLRSSTV 291
PL RRD L +L+++ +G+ S ++ PA+ Y+ + H + Y L +
Sbjct: 689 PLEYRRDITDLVLLFKIKNGDVSISSASLLSPATSRYNTRSYHPNN---YRLFSTHNQNY 745
Query: 292 RFQRSFLPRTIRLWNELPS 348
++ S+ PRT++LWN LPS
Sbjct: 746 -YRNSYFPRTVKLWNSLPS 763
>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMI-PASRFYHRTARHRSRVHPYYLEPLRSSTV 291
PL RRD L +L+++ +G+ S ++ PA+ Y+ + H + Y L +
Sbjct: 192 PLEYRRDITDLVLLFKIKNGDVSISSASLLSPATSRYNTRSYHPNN---YRLFSTHNQNY 248
Query: 292 RFQRSFLPRTIRLWNELPS 348
++ S+ PRT++LWN LPS
Sbjct: 249 -YRNSYFPRTVKLWNSLPS 266
>SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)
Length = 243
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/99 (30%), Positives = 43/99 (43%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+ L +RR LC+ Y++ L + +F R R+ Y ++S+ +
Sbjct: 141 DSLEVRRQLAQLCLFYKI-----RNNLVNIALPQQFQPNLRRSRTNSSKY--NQIQSNVL 193
Query: 292 RFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 408
SF PRTIR WN LPS V E + FK VL
Sbjct: 194 SHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 231
>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
Length = 278
Score = 40.7 bits (91), Expect = 7e-04
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +1
Query: 106 QVEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHR-SRVHPYYLEPLRS 282
Q L LRR L +LY++ G+ + + H+ R R S YY E ++
Sbjct: 179 QWSTLELRRTMARLTLLYKLSRGQIDIDTSTYLRP----HQDLRTRNSHNFKYYQE--KA 232
Query: 283 STVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 396
+ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 233 TKNKYFYSFFPRTIRHWNTLPNELV-ELDSIEHFKRDL 269
>SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 174
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +1
Query: 106 QVEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHR-SRVHPYYLEPLRS 282
Q L LRR L +LY++ G+ + + H+ R R S YY E ++
Sbjct: 75 QWSTLELRRTMARLTLLYKLSRGQIDIDTSMYLRP----HQDLRTRNSHNFKYYQE--KA 128
Query: 283 STVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 396
+ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 129 TKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 165
>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
Length = 361
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +1
Query: 106 QVEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHR-SRVHPYYLEPLRS 282
Q L LRR L +LY++ G+ + + H+ R R S YY E ++
Sbjct: 262 QWSTLELRRTMARLTLLYKLSRGQIDIDTSMYLRP----HQDLRTRNSHNFKYYQE--KA 315
Query: 283 STVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 396
+ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 316 TKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 352
>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/95 (33%), Positives = 45/95 (47%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+PL RR SL +L + L +++ SR RT +H +Y P + T
Sbjct: 144 QPLEDRRRTSSLVLLNSGLNNASILPLEDLMKPSRALPRT-QHSE----FYTIP-NARTD 197
Query: 292 RFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 396
++ SFLPR +RLWN LP +V R F GL
Sbjct: 198 IYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHAGL 232
>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
Length = 375
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +1
Query: 106 QVEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHR-SRVHPYYLEPLRS 282
Q L LRR L +LY++ G+ + + H+ R R S YY E ++
Sbjct: 276 QWSTLELRRTMARLTLLYKLSRGQIDIDTNMYLRP----HQDLRTRNSHNFKYYQE--KA 329
Query: 283 STVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 396
+ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 330 TKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 366
>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
Length = 231
Score = 39.9 bits (89), Expect = 0.001
Identities = 31/95 (32%), Positives = 42/95 (44%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+PL RR SL +L + L ++ SR RT H + L + T
Sbjct: 143 QPLEDRRRTSSLVLLNSGLNNASILPLEDLRKPSRALPRTQ------HSEFYTILNARTD 196
Query: 292 RFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 396
++ SFLPR +RLWN LP +V R F GL
Sbjct: 197 IYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHSGL 231
>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 581
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +1
Query: 106 QVEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHR-SRVHPYYLEPLRS 282
Q L LRR L +LY++ G+ + + H+ R R S YY E ++
Sbjct: 482 QWSTLELRRTMARLTLLYKLSRGQIDIDTNMYLRP----HQDLRTRNSHNFKYYQE--KA 535
Query: 283 STVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 396
+ ++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 536 TKNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 572
>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 666
Score = 39.9 bits (89), Expect = 0.001
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 118 LGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHR-SRVHPYYLEPLRSSTVR 294
L LRR L +LY++ G+ + + H+ R R S YY E +++ +
Sbjct: 571 LELRRTMARLTLLYKLSRGQIDIDTSMYLRP----HQDLRTRNSHNFKYYQE--KATKNK 624
Query: 295 FQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 396
+ SF PRTIR WN LP+ + E + FKR L
Sbjct: 625 YFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 657
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +1
Query: 235 RHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRV 405
R R HP PL +S+ SF RTI WN LP+ +F E + FK + R+
Sbjct: 823 RKTRRSHPESFIPLSTSSASEHLSFFSRTIIQWNNLPALLFNEPCSLPIFKDKISRL 879
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+ L +RR LC+ Y++ L + +F R+ Y ++S+ +
Sbjct: 816 DSLEVRRQLAQLCLFYKI-----RNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 868
Query: 292 RFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 408
SF PRTIR WN LPS V E + FK VL
Sbjct: 869 SHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 906
>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 198
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+ L +RR LC+ Y++ L + +F R+ Y ++S+ +
Sbjct: 96 DSLEVRRQLAQLCLFYKI-----RNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 148
Query: 292 RFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 408
SF PRTIR WN LPS V E + FK VL
Sbjct: 149 SHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 186
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+ L +RR LC+ Y++ L + +F R+ Y ++S+ +
Sbjct: 735 DSLEVRRQLAQLCLFYKI-----RNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 787
Query: 292 RFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 408
SF PRTIR WN LPS V E + FK VL
Sbjct: 788 SHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 825
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +1
Query: 244 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLS 411
SR H L+++ + F SF PRTIR WN LP+ V D+ FK L +S
Sbjct: 1627 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSALAPAIS 1681
>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
Length = 243
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+ L +RR LC+ Y++ L + +F R+ Y ++S+ +
Sbjct: 141 DSLEVRRQLAQLCLFYKI-----RNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 193
Query: 292 RFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 408
SF PRTIR WN LPS V E + FK VL
Sbjct: 194 SHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 231
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/97 (29%), Positives = 46/97 (47%)
Frame = +1
Query: 106 QVEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSS 285
Q L LRR L +LY++ G+ + + H+ R R+ H + +++
Sbjct: 725 QWSTLELRRTMARLTLLYKLSRGQIDIDTNMYLRP----HQDLRTRNS-HNFKCYQEKAT 779
Query: 286 TVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 396
++ SF PRTIR WN LP+ + E + FKR L
Sbjct: 780 KNKYFYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 815
>SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
Length = 152
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+ L +RR LC+ Y++ L + +F R+ Y ++S+ +
Sbjct: 50 DSLEVRRQLAQLCLFYKI-----RNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 102
Query: 292 RFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 408
SF PRTIR WN LPS V E + FK VL
Sbjct: 103 SHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 140
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 244 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGL 396
SR H L+++ + F SF PRTIR WN LP+ V D+ FK L
Sbjct: 1073 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSAL 1122
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/92 (29%), Positives = 40/92 (43%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+ L +RR LC+ Y++ L + +F R+ Y ++S+ +
Sbjct: 507 DSLEVRRQLAQLCLFYKI-----RNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 559
Query: 292 RFQRSFLPRTIRLWNELPSTVFPERYDMSFFK 387
SF PRTIR WN LPS V E + FK
Sbjct: 560 SHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFK 590
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+ L +RR LC+ Y++ L + +F R+ Y ++S+ +
Sbjct: 403 DSLEVRRQLAQLCLFYKI-----RNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 455
Query: 292 RFQRSFLPRTIRLWNELPSTV 354
SF PRTIR WN LPS V
Sbjct: 456 SHSYSFFPRTIRTWNLLPSEV 476
>SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5)
Length = 210
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +1
Query: 127 RRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRS 306
+R S IL+ FH ++ +P R+ R R YY + L+++T+ F S
Sbjct: 112 QRRLTSQAILFYKFHNSL---IYAKLPD--LVTRSTRSTRRKELYYNQ-LQANTLAFNYS 165
Query: 307 FLPRTIRLWNELPSTV 354
F R IR+WN LP+ V
Sbjct: 166 FFARAIRIWNLLPNDV 181
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +1
Query: 127 RRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRS 306
+R S IL+ FH ++ +P R+ R R YY + L+++T+ F S
Sbjct: 472 QRRLTSQAILFYKFHNSL---IYAKLPD--LVTRSTRSTRRKELYYNQ-LQANTLAFNYS 525
Query: 307 FLPRTIRLWNELPSTV 354
F R IR+WN LP+ V
Sbjct: 526 FFARAIRIWNLLPNDV 541
>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
Length = 284
Score = 37.5 bits (83), Expect = 0.007
Identities = 28/99 (28%), Positives = 42/99 (42%)
Frame = +1
Query: 112 EPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTV 291
+ L +RR LC+ Y++ L + +F R+ Y ++S+ +
Sbjct: 182 DSLEVRRQLAQLCLFYKI-----RNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 234
Query: 292 RFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 408
SF PRTIR WN LP+ V E + FK VL
Sbjct: 235 SHSYSFFPRTIRTWNLLPAQVV-ESSSIDSFKSSALPVL 272
>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
Length = 609
Score = 37.5 bits (83), Expect = 0.007
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 106 QVEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHR-SRVHPYYLEPLRS 282
Q L LRR L +LY++ G+ + + H+ R R S YY E ++
Sbjct: 508 QWSTLELRRTMARLTLLYKLSRGQIDIDTSMYLRP----HQDLRTRNSHNFKYYQE--KA 561
Query: 283 STVRFQRSFLPRTIRLWNELPS 348
+ ++ SF PRTIR WN LP+
Sbjct: 562 TKNKYFYSFFPRTIRHWNTLPN 583
>SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 244 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 354
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 122 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 158
>SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082)
Length = 506
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 244 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 354
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 441 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 477
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 244 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 354
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 1427 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 1463
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 244 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 354
+R H + L+S+ + + SF PR IR+WN LPS V
Sbjct: 387 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 423
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 36.3 bits (80), Expect = 0.016
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +1
Query: 202 IPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERY 369
+P S R HP + + + T F+ SF+PR IRLWN L TV Y
Sbjct: 713 LPLSTLSKPLRRSERTSHPEHYDIPYARTNIFKYSFVPRAIRLWNSLEVTVVLAAY 768
>SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 36.3 bits (80), Expect = 0.016
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 226 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 354
R+ R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 294 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 335
>SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 36.3 bits (80), Expect = 0.016
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 226 RTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 354
R+ R R YY + L+++T+ F SF R IR+WN LP+ V
Sbjct: 245 RSTRSTRRKELYYNQ-LQANTLAFNYSFFARAIRIWNLLPNDV 286
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 127 RRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRS 306
+R S IL+ FH ++ +P R+ R R Y L+++T+ F S
Sbjct: 1182 QRRLTSQAILFYKFHNSL---IYAKLPD--LVTRSTRSTRRKE-LYCNQLQANTLTFNYS 1235
Query: 307 FLPRTIRLWNELPSTV 354
F R IR+WN LP+ V
Sbjct: 1236 FFARAIRIWNLLPNDV 1251
>SB_25119| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.4)
Length = 443
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 244 SRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTV 354
+R H + L S+ + F SF PR IR WN LP +
Sbjct: 262 TRRHSLSFQQLHSNILSFNYSFFPRAIRAWNLLPDNI 298
>SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)
Length = 294
Score = 35.1 bits (77), Expect = 0.036
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
PL RR L + Y+ + + + E+ + I RT + RS HP L +T
Sbjct: 205 PLSKRRQNARLTLFYKAVNKKSALEIPDNID-----RRTRQLRSS-HPDKFIELCPTTEA 258
Query: 295 FQRSFLPRTIRLWNELP 345
++ SF RTI+ WN+LP
Sbjct: 259 YKNSFFCRTIKEWNKLP 275
>SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2)
Length = 251
Score = 34.7 bits (76), Expect = 0.048
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +1
Query: 118 LGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRF 297
L +RR L + Y++ HG + +P R + +S Y P S+
Sbjct: 160 LEIRRKRARLLMFYKIHHGLVVTDGLPAVPPMYIISRHMKSQS-----YKVPPSSTDYHK 214
Query: 298 QRSFLPRTIRLWNELP 345
++SF P TIR WN LP
Sbjct: 215 KKSFFPPTIRDWNCLP 230
>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
Length = 244
Score = 33.9 bits (74), Expect = 0.084
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 127 RRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRS 306
RR+ L YR+ G SE + Y T ++ HP + T F+ S
Sbjct: 161 RREKARLAFFYRINKG-LSEISMPPYATPQMYTITRQY----HPQRFALVSCKTNVFKES 215
Query: 307 FLPRTIRLWNELP-STV 354
F P IR+WN LP ST+
Sbjct: 216 FFPHAIRMWNGLPVSTI 232
>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 33.9 bits (74), Expect = 0.084
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
PL RR L + Y+ + + + ++ + I RT + RS HP L T
Sbjct: 314 PLSKRRQDARLTLFYKAVNKKSALKIPDNID-----RRTRQLRSS-HPDKFIELCPRTEA 367
Query: 295 FQRSFLPRTIRLWNELP 345
F+ SF RTI+ WN+LP
Sbjct: 368 FKNSFFCRTIKEWNKLP 384
>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +1
Query: 127 RRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRS 306
RR L + Y++ G + + + T + + L P + + F S
Sbjct: 772 RRIVSDLALFYKINSGLVKIDFLPDVSPKPAVYFTRTSACNSYQFSLLPAKINAFLF--S 829
Query: 307 FLPRTIRLWNELPSTVFP 360
F RTI +WN LP VFP
Sbjct: 830 FYSRTIPVWNALPQAVFP 847
>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 33.1 bits (72), Expect = 0.15
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 127 RRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRS 306
RR+ L YR+ G SE + Y T ++ HP + T F+ S
Sbjct: 579 RREKARLAFFYRINKG-LSEISTPPYATPQMYTITRQY----HPQRFALVSCKTNVFKES 633
Query: 307 FLPRTIRLWNELP-STV 354
F P IR+WN LP ST+
Sbjct: 634 FFPHAIRMWNGLPVSTI 650
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
PL RR L + Y+ + + + ++ + I RT + RS + ++E L T
Sbjct: 611 PLSKRRQDARLTLFYKAVNKKSALKIPDNID-----RRTRQLRSSLPDKFIE-LCPRTEA 664
Query: 295 FQRSFLPRTIRLWNELP 345
++ SF RTI+ WN+LP
Sbjct: 665 YKNSFFCRTIKEWNKLP 681
>SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7)
Length = 282
Score = 31.5 bits (68), Expect = 0.45
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWNELPSTV 354
L+S+ + + SF R IR+WN LPS V
Sbjct: 227 LQSNILSYNYSFFARAIRIWNLLPSNV 253
>SB_54075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 729
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 281 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 337
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 338 GDRSFSNFAAKLWNSLP 354
>SB_48543| Best HMM Match : Exo_endo_phos (HMM E-Value=7.8e-06)
Length = 768
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 668 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSLSLRSANKNLLVIPKSRTKTY 724
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 725 GDRSFSNFAAKLWNSLP 741
>SB_43430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 49 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 105
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 106 GDRSFSNFAAKLWNSLP 122
>SB_42334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 49 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 105
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 106 GDRSFSNFAAKLWNSLP 122
>SB_36028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 80 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 136
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 137 GDRSFSNFAAKLWNSLP 153
>SB_24690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 92 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 148
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 149 GDRSFSNFAAKLWNSLP 165
>SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 1273
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 556 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 612
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 613 GDRSFSNFAAKLWNSLP 629
>SB_9140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 49 PVASRIDFEILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 105
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 106 GDRSFSNFAAKLWNSLP 122
>SB_4338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 441 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 497
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 498 GDRSFSNFAAKLWNSLP 514
>SB_2173| Best HMM Match : DUF1401 (HMM E-Value=6.3)
Length = 275
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 184 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 240
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 241 GDRSFSNFAAKLWNSLP 257
>SB_50776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 184 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 240
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 241 GDRSFSNFAAKLWNSLP 257
>SB_41244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 84 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 140
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 141 GDRSFSNFAAKLWNSLP 157
>SB_31163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 49 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 105
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 106 GDRSFSNFAAKLWNSLP 122
>SB_7536| Best HMM Match : DUF1401 (HMM E-Value=7.9)
Length = 180
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 80 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 136
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 137 GDRSFSNFAAKLWNSLP 153
>SB_2999| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 630
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 530 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 586
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 587 GDRSFSNFAAKLWNSLP 603
>SB_2489| Best HMM Match : RVT_1 (HMM E-Value=0.02)
Length = 385
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 285 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 341
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 342 GDRSFSNFAAKLWNSLP 358
>SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 136 FGSLC-ILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFL 312
F S+C ++Y +G + + ++ H S + +Y++ S + QR+
Sbjct: 69 FESVCHLMYDTRNGTAPPNILNLFTDTKSVHSYNTRSSTSNKFYIQ---KSRLEIQRNSF 125
Query: 313 PRT-IRLWNELPSTV 354
R R+WNELP ++
Sbjct: 126 SRVGARVWNELPQSL 140
>SB_27890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 65 PVASRIDFKILTITHKALHNQALEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 121
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 122 GDRSFSNFAAKLWNSLP 138
>SB_18718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 92 PVASRIDFKILTITHKALHNQALEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 148
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 149 GDRSFSNFAAKLWNSLP 165
>SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 441 PVASRIDFKILTITHKGLHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 497
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 498 GDRSFSNIAAKLWNSLP 514
>SB_8907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ + DF L I ++ H + E + E++ Y + RS + P +
Sbjct: 690 PVATKIDFKILIITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTY 746
Query: 295 FQRSFLPRTIRLWNELP 345
RSF +LWN LP
Sbjct: 747 GDRSFSNFAAKLWNSLP 763
>SB_22775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFDMSFIPRTIRTWN 124
>SB_8123| Best HMM Match : Tfb2 (HMM E-Value=0.00019)
Length = 448
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 316 RTIRLWNELPSTVFPERYDM-SFFKRGLWRVLSGRQRLGSAPGIA 447
+ +R+W E+PS V +RY+M + F+ + L G + GS P I+
Sbjct: 59 KQLRIWREVPSGVH-KRYEMNATFRTNMKAALCGGESPGSNPIIS 102
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 311 CHVPSGYGMSSPPRCFPSAMTCPSSNEA 394
C P GY + +P RC S +C SS A
Sbjct: 2147 CSCPQGYRLENPYRCVLSNASCASSEFA 2174
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 275 CGHPQCVSRDLFCHVPSGYGMSSPPRCFPSAMTCPS 382
C +C+SRD C + G SS + +TCP+
Sbjct: 3053 CPSGRCISRDWLCDGDNDCGDSSDEKAGECHVTCPA 3088
>SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11)
Length = 1771
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I + H + E + E++ + +R V+ L +S T
Sbjct: 1677 PVATRIDFKILTITHIALHNQAPEYITELLTP----YTPSRSLRSVNKNLLVIPKSRTKT 1732
Query: 295 F-QRSFLPRTIRLWNELP 345
+ RSF +LWN LP
Sbjct: 1733 YGDRSFSNFAAKLWNSLP 1750
>SB_58576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16)
Length = 453
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 398 LQANVNAFGMSFIPRTIRTWN 418
>SB_48902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_40552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_38731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2)
Length = 318
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 419 SGLALPLALLKSMGDGNHSPSGGPYARLPTK 511
SG+ PLA S D H P GGP A PT+
Sbjct: 33 SGIFSPLASSTSASDSRHRPVGGP-AYSPTE 62
>SB_34180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 467 LQANVNAFGMSFIPRTIRTWN 487
>SB_33284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 208 LQANVNAFGMSFIPRTIRTWN 228
>SB_32643| Best HMM Match : Carla_C4 (HMM E-Value=9.9)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_30890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 837 LQANVNAFGMSFIPRTIRTWN 857
>SB_24244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_22251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 442 LQANVNAFGMSFIPRTIRTWN 462
>SB_36764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_36762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_29800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_24298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_19305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 104 LQANVNAFGMSFIPRTIRTWN 124
>SB_14496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 274 LRSSTVRFQRSFLPRTIRLWN 336
L+++ F SF+PRTIR WN
Sbjct: 55 LQANVNAFGMSFIPRTIRTWN 75
>SB_47354| Best HMM Match : RVT_1 (HMM E-Value=2e-07)
Length = 773
Score = 27.9 bits (59), Expect = 5.5
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 115 PLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVR 294
P+ R DF L I ++ H + E + E++ Y +A V P +S T
Sbjct: 678 PVASRIDFKILTITHKALHNQAPEYITELLTP---YTPSANKNLLVIP------KSRTKT 728
Query: 295 F-QRSFLPRTIRLWNELP 345
+ RSF +LWN LP
Sbjct: 729 YGDRSFSNFAAKLWNSLP 746
>SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1858
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +1
Query: 127 RRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRS 306
R DF L I ++ H + E + E++ Y + RS + P + RS
Sbjct: 361 RIDFKILTITHKALHNQAPEYITELLTP---YTPSRSLRSANKNLLVIPKSRTKTYGDRS 417
Query: 307 FLPRTIRLWNELP 345
F +LWN LP
Sbjct: 418 FSNFAAKLWNSLP 430
>SB_53803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 27.9 bits (59), Expect = 5.5
Identities = 29/117 (24%), Positives = 46/117 (39%)
Frame = +2
Query: 137 SVPSVFCTVCSMGSALRNCSR*YQHLVFTIAPPATGVEFIHTTWSHCGHPQCVSRDLFCH 316
+VP+V TV ++ + N + VFT+ V + + CG PQC C
Sbjct: 135 TVPNVVFTVRNVVFTVPNVVFTVPNAVFTVPNVVFTVPNVVFS-PQCGSPQCGIHSTQCG 193
Query: 317 VPSGYGMSSPPRCFPSAMTCPSSNEAYGEY*AVGSGLALPLALLKSMGDGNHSPSGG 487
+ S P+C + C + G + + G+ P + S G HSP G
Sbjct: 194 IHSPQCGIHSPQCGIYSPQCGIHSPQCGIH-STQCGIHSPQCGIHSPQCGIHSPQCG 249
Score = 27.5 bits (58), Expect = 7.3
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 140 VPSVFCTVCSMGSALRNCSR*YQHLVFTIAPPATGVEFIHTTWSHCGHPQCVSRDLFCHV 319
VP+V TV ++ S + N ++VF+ P G IH+T CG PQC C +
Sbjct: 393 VPNVVFTVPNVVSTVPNVVSTVPNVVFS---PQCG---IHST--QCGSPQCGIHSTQCGI 444
Query: 320 PSGYGMSSPPRC 355
S P+C
Sbjct: 445 HSTQCGIHSPQC 456
>SB_36259| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 790
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 304 SFLPRTIRLWNELPSTVFPE-RYDMSF 381
SF P +I+ WN LP+T R + SF
Sbjct: 752 SFFPWSIKFWNNLPATALKSTRVNQSF 778
>SB_21791| Best HMM Match : V-set (HMM E-Value=1.4)
Length = 474
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 226 DGKNEMLVSSRTIPQSTPHGTYGTKYRGNRSPSADPEAP 110
DG+ ++ S+ +P+ PH + YR N S S +P +P
Sbjct: 139 DGRYVIVGSASYVPED-PHPFFFDIYRNNESVSPNPRSP 176
>SB_40696| Best HMM Match : DUF1096 (HMM E-Value=5.5)
Length = 582
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 351 GVSRAL*HVLLQTRLMESIKR*AAAWLCPWHC*SPWATVTTHHQVGRMPV 500
G S A+ +LL + ES K+ + PW C S W + H ++G +PV
Sbjct: 200 GYSAAVTDILLAS-WSESTKK---RYQGPWKCWSQWCSSRDHIKLGDLPV 245
>SB_25515| Best HMM Match : Complex1_LYR (HMM E-Value=9.6)
Length = 304
Score = 27.5 bits (58), Expect = 7.3
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +1
Query: 103 HQVEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPLRS 282
HQ+E LRR + Y++ HG + + + T L P
Sbjct: 206 HQLE---LRRTVFDSVMFYKIHHGLVKIDFPSDVIRKPGSYATRSSVRNTCQLTLPP--P 260
Query: 283 STVRFQRSFLPRTIRLWNELP 345
S +F+ SF RTI +WN LP
Sbjct: 261 SINQFKYSFFSRTIPVWNSLP 281
>SB_51388| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 670
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 304 SFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRLGSAPGIAE 450
SF P +I WN LP ++ + + FK L + L + G G AE
Sbjct: 525 SFFPWSINFWNNLPGSITNIK-EKGKFKEKLQQHLIDNGQWGEGQGDAE 572
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Frame = +1
Query: 178 CSEELFEM--IPASRFYHRTARHRS------RVHPYYLEPLR 279
CS F + P+S FY+R RH R HP+Y LR
Sbjct: 1229 CSPSSFSLPCSPSSSFYYRVLRHHPFHYRVLRHHPFYYRVLR 1270
>SB_42286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1820
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 218 KRDAGIISNNSSEHSPW-NIRYKIQREPKSLRRPRGSTWC*VVTGAH 81
+R GI ++ S +P+ + + + R L+RPR T +V GA+
Sbjct: 1729 QRSKGIGESHHSSEAPYAKVTHYVARHGSDLQRPRKETVSTIVAGAN 1775
>SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21)
Length = 447
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 212 LVFTIAPPATGVEFIHTTWSHCGHPQCVSRDLFC 313
LV P TG+ TTW G PQ D+ C
Sbjct: 32 LVIWQPDPDTGIWIETTTWHEIGRPQVHGYDMQC 65
>SB_26191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 253 HPYYLEPLRSSTVRFQRSFLPRTI-RLW 333
HPYY E + SS + F+ + + RTI R W
Sbjct: 78 HPYYSERMLSSVLLFRENGIIRTIQREW 105
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,256,114
Number of Sequences: 59808
Number of extensions: 492838
Number of successful extensions: 1675
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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