Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0331
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.1  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   6.1  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 431 TTKFYFKSVYENVSFNFAYTIFILFFYTAT 342
           T  + + SV+E    NF YT+     +T+T
Sbjct: 155 TVYYIYYSVHEASIINFGYTLAKFMIFTST 184


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 222 YIFCVVVCVCPMRM-TAHILFCWFDIFFLIDVVVL 323
           ++ C+    C   + T H+LFC   IFF + ++ L
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFL 196



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +3

Query: 207 CVINKYIFCVVVCVCPMRMTAHILFCWFDIFFLIDVVVL 323
           C+   Y   ++ C   +  T H+LF     +F   +++L
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIIL 295


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 481  IWYILCISLYILMKKKKLFSRNNI 552
            I+Y+   S+Y+L+    +F+ NN+
Sbjct: 1007 IYYVTVPSMYLLLVIYSVFNMNNV 1030


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 481  IWYILCISLYILMKKKKLFSRNNI 552
            I+Y+   S+Y+L+    +F+ NN+
Sbjct: 1007 IYYVTVPSMYLLLVIYSVFNMNNV 1030


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 462 FTFENKNLVYFVHLSIYINEK 524
           FTF  KNL Y    S YI++K
Sbjct: 172 FTFHKKNLYY----SFYISDK 188


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 220 LFITHNRRKRINFVFNN*SFQTINIY 143
           L +  N RK+++F+F   +  TI +Y
Sbjct: 435 LGMRRNFRKKLDFIFTFITLLTIGLY 460


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 520 SLIYIERCTKYTKFLFSNVN 461
           +L Y+ERC K T  L+ +V+
Sbjct: 44  NLKYLERCIKETLRLYPSVH 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,878
Number of Sequences: 336
Number of extensions: 3949
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)