Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0325
(601 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 48 8e-06
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 48 8e-06
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 48 8e-06
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 48 8e-06
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 48 8e-06
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 48 8e-06
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8) 42 4e-04
SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5) 40 0.001
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 38 0.006
SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2) 34 0.076
SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17) 30 1.2
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 28 6.6
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_53761| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 27 8.8
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 6 DVVKRRPVNCNTTHYRANW 24
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 62 DVVKRRPVNCNTTHYRANW 80
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 630 DVVKRRPVNCNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 41 DVVKRRPVNCNTTHYRANW 59
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 3 DVVKRRPVNCNTTHYRANW 21
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 43 DVVKRRPVNCNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 1881 DVVKRRPVNCNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 41 DVVKRRPVNCNTTHYRANW 59
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 3 DVVKRRPVNCNTTHYRANW 21
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 35 DVVKRRPVNCNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 84 DVVKRRPVNCNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 62 DVVKRRPVNCNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 73 DVVKRRPVNCNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 49 DVVKRRPVNCNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGNW 544
DVVKRRPVNCNTTHYR NW
Sbjct: 73 DVVKRRPVNCNTTHYRANW 91
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGN 547
DVVKRRPVNCNTTHYR N
Sbjct: 23 DVVKRRPVNCNTTHYRAN 40
>SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8)
Length = 142
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 511 RELVLEGGPRDPIPPIVSRITIHWPSFYN 597
R +GG PI PIVSRITIHWP+FYN
Sbjct: 30 RAAATDGGA--PIRPIVSRITIHWPAFYN 56
>SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5)
Length = 131
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1
Query: 544 PIPPIVSRITIHWPSFYN 597
PI PIVS ITIHWPSFYN
Sbjct: 41 PIRPIVSHITIHWPSFYN 58
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2
Query: 600 DVVKRRPVNCNTTHYRGN 547
D KRRPVNCNTTHYR N
Sbjct: 80 DGEKRRPVNCNTTHYRAN 97
>SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/36 (55%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 499 CNLQRELVLEGGPR--DPIPPIVSRITIHWPSFYNV 600
C+ LVLE P P +SRITIHWPSFYNV
Sbjct: 57 CSPGDPLVLERPPPRWSSNSPYMSRITIHWPSFYNV 92
>SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 547 IPPIVSRITIHWPSFY 594
I PIVSRITIHWPSFY
Sbjct: 18 IRPIVSRITIHWPSFY 33
>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 553 PIVSRITIHWPSFYNV 600
P+VSRITIHW SFYNV
Sbjct: 35 PVVSRITIHWTSFYNV 50
>SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2)
Length = 98
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 562 SRITIHWPSFYNV 600
SRITIHWPSFYNV
Sbjct: 2 SRITIHWPSFYNV 14
>SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)
Length = 786
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = -1
Query: 553 GELGPGAPPRELVLSVNYILFTIMSKPNVLTRILDAIAETNTKVDSVQTQLNGLEESFQP 374
G L A R+L + + + K + L +L I + + + Q L +FQ
Sbjct: 38 GHLESVATARDLFTELMHNCYLSKDKRDCLASLLYHIGRHDLRNRLLGKQETTLTLAFQH 97
Query: 373 LDGLPAQLTDFNTKISEIQSILT 305
GLPA++ +F + SE Q++ T
Sbjct: 98 WGGLPAKVPNFVGRESECQAVFT 120
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 421 DSVQTQLNGLEESFQPLDGLPAQLTDFNTKISEIQSIL 308
D +Q + L ++ +D L AQL + KISE+ S+L
Sbjct: 803 DEMQKASSELLDTKSTMDALRAQLVEKQNKISELDSLL 840
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -1
Query: 544 GPGAPPRELVLSVNYILFTIMSKPNVLTRILDAIAETNTKVDSVQTQLNGLEESFQPLDG 365
G P +++V V + I S P++L R+L A T S+ N + +P G
Sbjct: 1249 GVTVPGKQIVAGVKQV--PIHSSPDILARVLPAPTSTPLMNVSIANPSNQSLANIKPALG 1306
Query: 364 LPA 356
+PA
Sbjct: 1307 VPA 1309
>SB_53761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 284 RIRSSVTGQYGLNF*DFSVKISQLSGQTVQRLE 382
R+R+S+ QY F F +I + G TVQ+ +
Sbjct: 314 RLRASILEQYVKGFVAFGCEIQKFGGYTVQKFQ 346
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/67 (23%), Positives = 36/67 (53%)
Frame = -1
Query: 508 VNYILFTIMSKPNVLTRILDAIAETNTKVDSVQTQLNGLEESFQPLDGLPAQLTDFNTKI 329
+N + + +K + L ++ + NTKV+ T++N L L+ A++ D NTK+
Sbjct: 363 LNTKVHDLNAKVHDLNTKVNDLNTKNTKVNDQNTKVNDLNTKVHDLN---AKVHDLNTKV 419
Query: 328 SEIQSIL 308
++ +++
Sbjct: 420 HDLNTMV 426
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,683,952
Number of Sequences: 59808
Number of extensions: 302892
Number of successful extensions: 1090
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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