Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0323
         (742 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    48   2e-04
UniRef50_Q0SCV3 Cluster: Ammonium transporter; n=4; Actinomyceta...    33   5.6  
UniRef50_A7AR10 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_Q8H931 Cluster: Putative UDP-glucose 4-epimerase; n=5; ...    33   9.7  
UniRef50_Q8MQ86 Cluster: Putative uncharacterized protein F02G3....    33   9.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = -1

Query: 169 FLLLRWVNELTAHLVLSSYWSP 104
           FLLLRWV+ELTAHLVLS YWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q0SCV3 Cluster: Ammonium transporter; n=4;
           Actinomycetales|Rep: Ammonium transporter - Rhodococcus
           sp. (strain RHA1)
          Length = 450

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
 Frame = -1

Query: 634 SPKSRSKLLCELESGCDFFGVYSFRIDLHI*A---RGMKIMGTKIVLACHTKCVMRLIGS 464
           SP+  S  L  L +G  FFG + F     + A     + I+ T +  +C   C   ++  
Sbjct: 204 SPRPHSLPLTMLGAGILFFGWFGFNGGSALSAGNSASVVILNT-VAASCAGICAWLVVEK 262

Query: 463 *LRDACARQSGANGA--AALSQVTPGCCAGSPPQSLVLIARFSHYCIF 326
            LR+  A   GA     AAL  +TP C A SP  +LV+       C F
Sbjct: 263 -LREGHATSLGAASGLIAALVAITPACGAVSPLGALVVGGAAGAVCCF 309


>UniRef50_A7AR10 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 734

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 129 RWAVSSFTHLSNKKSVCVRSDARLEFTGYKKLNETIREIVLYYDNTIH 272
           RW   SFT L +K  +CV    +L       L+  +R ++L +D+++H
Sbjct: 401 RWQPESFTELLSK--ICVLVKTQLSNASLFSLSSLLRAVILLHDSSVH 446


>UniRef50_Q8H931 Cluster: Putative UDP-glucose 4-epimerase; n=5;
           Oryza sativa|Rep: Putative UDP-glucose 4-epimerase -
           Oryza sativa subsp. japonica (Rice)
          Length = 408

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +3

Query: 183 RSDARLEFTGYKKLNETIREIVLYYDNTIH 272
           R DA + F G K + E++++ +LYYDN+++
Sbjct: 87  RFDAVVHFAGLKAVGESVQKPLLYYDNSVN 116


>UniRef50_Q8MQ86 Cluster: Putative uncharacterized protein F02G3.1;
           n=4; Caenorhabditis|Rep: Putative uncharacterized
           protein F02G3.1 - Caenorhabditis elegans
          Length = 955

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -1

Query: 682 RNRNEVVIFGNSVQLGSPKSRSKLLCELESGCDFFGVYSFRID 554
           +N  EV   G S+Q+ +  S +KL  E   G D FGVY+ R D
Sbjct: 541 KNGKEVEANGVSIQIFTQGSSTKLTLENFDGSDNFGVYTCRAD 583


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,235,455
Number of Sequences: 1657284
Number of extensions: 14456517
Number of successful extensions: 32658
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32649
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)