Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0319
(689 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 454 e-128
SB_56| Best HMM Match : Actin (HMM E-Value=0) 454 e-128
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 453 e-128
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 451 e-127
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 301 4e-82
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 294 4e-80
SB_54| Best HMM Match : Actin (HMM E-Value=0) 268 3e-72
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 256 1e-68
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 205 3e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 173 1e-43
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 111 5e-25
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 2e-23
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 72 4e-13
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 7e-13
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 5e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 48 9e-06
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.001
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.071
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.094
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.29
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 33 0.29
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.50
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.67
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.2
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.2
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 31 1.2
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.5
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.5
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 30 2.0
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.0
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.0
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 2.7
SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064) 29 2.7
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 3.6
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 3.6
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 29 4.7
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 4.7
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 29 4.7
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 4.7
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 4.7
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 4.7
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 4.7
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 4.7
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 6.2
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 6.2
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.2
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 6.2
SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0) 28 6.2
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 28 6.2
SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) 28 8.2
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 8.2
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 8.2
SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 8.2
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 8.2
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 8.2
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 8.2
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 454 bits (1119), Expect = e-128
Identities = 214/221 (96%), Positives = 218/221 (98%)
Frame = +2
Query: 2 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 181
DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 182 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 361
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYA
Sbjct: 112 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171
Query: 362 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 541
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TA
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTA 231
Query: 542 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGYGS 664
ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG S
Sbjct: 232 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMES 272
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 642 PRSWGMEACGIHETTY 689
P GME+ GIHETTY
Sbjct: 265 PSFLGMESAGIHETTY 280
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 454 bits (1118), Expect = e-128
Identities = 214/221 (96%), Positives = 218/221 (98%)
Frame = +2
Query: 2 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 181
DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 51 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 110
Query: 182 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 361
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYA
Sbjct: 111 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 170
Query: 362 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 541
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TA
Sbjct: 171 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTA 230
Query: 542 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGYGS 664
ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG S
Sbjct: 231 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMES 271
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 642 PRSWGMEACGIHETTY 689
P GME+ GIHETTY
Sbjct: 264 PSFLGMESAGIHETTY 279
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 453 bits (1116), Expect = e-128
Identities = 213/221 (96%), Positives = 218/221 (98%)
Frame = +2
Query: 2 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 181
DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 182 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 361
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYA
Sbjct: 112 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171
Query: 362 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 541
LPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TA
Sbjct: 172 LPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETA 231
Query: 542 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGYGS 664
ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG S
Sbjct: 232 ASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMES 272
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 642 PRSWGMEACGIHETTY 689
P GME+ GIHETTY
Sbjct: 265 PSFLGMESAGIHETTY 280
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 451 bits (1111), Expect = e-127
Identities = 213/221 (96%), Positives = 218/221 (98%)
Frame = +2
Query: 2 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 181
DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 51 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 110
Query: 182 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 361
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYA
Sbjct: 111 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 170
Query: 362 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 541
LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATA
Sbjct: 171 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATA 230
Query: 542 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGYGS 664
A+SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG S
Sbjct: 231 AASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMES 271
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 642 PRSWGMEACGIHETTY 689
P GME+ GIHETTY
Sbjct: 264 PSFLGMESAGIHETTY 279
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 301 bits (738), Expect = 4e-82
Identities = 144/157 (91%), Positives = 151/157 (96%)
Frame = +2
Query: 194 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 373
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 374 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 553
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 554 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGYGS 664
SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG S
Sbjct: 198 SLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMES 234
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = +2
Query: 2 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 121
DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 51 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 642 PRSWGMEACGIHETTY 689
P GME+ GIHETTY
Sbjct: 227 PSFLGMESAGIHETTY 242
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 294 bits (722), Expect = 4e-80
Identities = 158/223 (70%), Positives = 172/223 (77%), Gaps = 2/223 (0%)
Frame = +2
Query: 2 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 181
DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 182 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--G 355
NPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE G
Sbjct: 112 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERG 171
Query: 356 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 535
Y+ R + RD+ + L + + E+E+ + A
Sbjct: 172 YSFTTTAEREIV--RDIKEKLCYVALD--------FEQEM-----------------QTA 204
Query: 536 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGYGS 664
++SS +EKSYELPDGQVITIGNERFRCPEAL QPSFLG S
Sbjct: 205 ASSSS--IEKSYELPDGQVITIGNERFRCPEALLQPSFLGMES 245
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 268 bits (657), Expect = 3e-72
Identities = 122/185 (65%), Positives = 149/185 (80%)
Frame = +2
Query: 101 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 280
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 281 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 460
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 461 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQ 640
AE++I+RD+KE LCY A+D+E+E+ A +S E Y LPDGQ I IG+ERFR E LFQ
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQ 2308
Query: 641 PSFLG 655
PS LG
Sbjct: 2309 PSLLG 2313
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 256 bits (627), Expect = 1e-68
Identities = 116/218 (53%), Positives = 155/218 (71%), Gaps = 1/218 (0%)
Frame = +2
Query: 2 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 178
D VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE P
Sbjct: 54 DLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPP 113
Query: 179 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 358
LNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+
Sbjct: 114 LNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGF 173
Query: 359 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 538
ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE
Sbjct: 174 ALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKL 233
Query: 539 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 652
A ++ L + Y LPDG+V+ + ERF PEALFQP +
Sbjct: 234 ALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLI 271
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 205 bits (500), Expect = 3e-53
Identities = 96/106 (90%), Positives = 102/106 (96%)
Frame = +2
Query: 215 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 394
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 395 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 532
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 173 bits (421), Expect = 1e-43
Identities = 82/151 (54%), Positives = 112/151 (74%)
Frame = +2
Query: 149 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 328
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 329 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 508
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE---- 241
Query: 509 ALDFEQEMATAASSSSLEKSYELPDGQVITI 601
S S + Y LPDG +I +
Sbjct: 242 ------------SMESERQQYALPDGSIIEV 260
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 111 bits (267), Expect = 5e-25
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Frame = +2
Query: 260 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 436
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 437 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF 616
RG++FT+++ +IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 617 RCPEALFQPSFL 652
E LF+P L
Sbjct: 887 SSMEPLFRPDLL 898
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 2e-23
Identities = 47/126 (37%), Positives = 80/126 (63%)
Frame = +2
Query: 59 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 238
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 239 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 418
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 419 MKILTE 436
++ E
Sbjct: 123 RQMFEE 128
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = +2
Query: 542 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 655
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLG
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLG 42
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +2
Query: 227 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 403
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 404 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 535
+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = +2
Query: 2 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 166
D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 283 DFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 296 TGIVLDSGDGVSHTVPI 346
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 47.6 bits (108), Expect = 9e-06
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 11/203 (5%)
Frame = +2
Query: 8 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 181
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE----------------- 315
Query: 182 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVP 343
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP
Sbjct: 316 ---GLEDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVP 372
Query: 344 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 523
++ G + A+ R + +L E +F ++ +KE CYV+ F
Sbjct: 373 VFNGKVIKKAVRR-----------QLHVLDE---TF-------VINQVKEDTCYVSSQFY 411
Query: 524 QEMATA---ASSSSLEKSYELPD 583
++M A +++ + Y LPD
Sbjct: 412 KDMEIARQRGKENTIVREYVLPD 434
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 104 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 283
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 284 SGRTTGIV 307
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 240 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 377
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 219 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 380
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 240 PPCTSPSKPCSRCTRPVVPPVSC 308
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 34.7 bits (76), Expect = 0.071
Identities = 29/77 (37%), Positives = 34/77 (44%)
Frame = +1
Query: 250 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 429
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 430 HRARLLVHYHRRAGNRS 480
R+R H R+ + S
Sbjct: 270 SRSRSPTHRRHRSRSHS 286
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.094
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 240 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 377
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.094
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 228 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 341
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 243 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 341
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 228 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 377
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +3
Query: 225 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 377
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 249 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 374
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 222 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 377
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 27.9 bits (59), Expect = 8.2
Identities = 28/91 (30%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Frame = +3
Query: 117 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 296
PST S S P ++ S + + PCT S P + T P P
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTH-STPSAPST-PSTP 75
Query: 297 PVSCW--TPATVSPTPCPSTKDTHS--PTPS 377
C TP+T S PST T S TPS
Sbjct: 76 STPCTPSTPSTPSTPSTPSTPSTPSAPSTPS 106
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +3
Query: 243 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 368
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 219 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 341
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 243 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 341
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 240 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 377
P SP+ P P P + TP T +PT TK T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 234 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 377
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 240 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 377
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 231 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 371
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +3
Query: 234 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 371
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 234 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 377
T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 231 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 377
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 240 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 335
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/88 (23%), Positives = 30/88 (34%)
Frame = +3
Query: 114 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 293
+PS M C PP S + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 294 PPVSCWTPATVSPTPCPSTKDTHSPTPS 377
P + TP T + TP +P P+
Sbjct: 145 PTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 404 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 583
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
Query: 584 GQVITIGNERFRCP 625
+ + + R CP
Sbjct: 276 LASLVLNSSR-ECP 288
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 237 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 365
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 50 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 202
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 191 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 307
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 396 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 217
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 216 IWVIFSLLALGLR 178
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 396 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 259
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 396 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 259
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 30.7 bits (66), Expect = 1.2
Identities = 40/127 (31%), Positives = 54/127 (42%)
Frame = +1
Query: 250 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 429
RR+ SR+ + R RS +R R+ R R R+ R+ S SRSR + P P
Sbjct: 147 RRYRSRSDS-RPRSRYRGRSRSRSRDRYRERRPRKSRSKSLD-RSRRSRSRSYSRPSPSP 204
Query: 430 HRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGNGHRCIQQLPREVLRTSRRSGHHYRKR 609
+R+R RR+ +RS RS R R + R R SRRS R R
Sbjct: 205 YRSRRSRSRTRRSRSRSRRS------RSRSRDRRPRRRSRDRERSRERRSRRSRDKSRSR 258
Query: 610 KIPLPRG 630
+ RG
Sbjct: 259 EKSRERG 265
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 228 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 374
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.2
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -3
Query: 336 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 184
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 183 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 19
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 30.7 bits (66), Expect = 1.2
Identities = 31/125 (24%), Positives = 46/125 (36%)
Frame = +3
Query: 234 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXXXXX 413
T P +P+ S P P + +T T S TP PS T S TP+ +T P
Sbjct: 15 TSTPSYTPTT--SYTPTPSYTPTTSYT-CTTSYTPTPSYTPTPSYTPTTSYT-PTTSYTP 70
Query: 414 XXXXXXXXXXXXXXXXXXGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRS 593
S+ ++ T+ TS+ + P P+ S T P+ S
Sbjct: 71 TTSYTPTPSYTPTTSYTPTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYTPTPSYTS 130
Query: 594 SLSET 608
+ S T
Sbjct: 131 TTSYT 135
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 219 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPS 377
C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 40 CTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 249 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 353
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 175 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 267
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 228 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 377
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 231 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 377
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +3
Query: 231 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT*P 395
+T P T+P+KP + T P + PAT +PT P +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 231 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 377
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 231 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 377
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 255 PSKPCSRCTRPVVPP 299
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/83 (27%), Positives = 29/83 (34%)
Frame = +1
Query: 172 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 351
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 352 RIRTPPRHPASGLSRSRPHRLPH 420
T P HP R+ P PH
Sbjct: 376 SKSTAPDHPHGVSKRTAPDH-PH 397
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +1
Query: 184 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRT 363
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 364 PPRHPASGLSR 396
P HP GLS+
Sbjct: 248 APDHP-HGLSK 257
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 29.9 bits (64), Expect = 2.0
Identities = 30/103 (29%), Positives = 37/103 (35%)
Frame = +1
Query: 232 QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHR 411
Q RRHP R R+ + G+R R P +RR RT R + R R H
Sbjct: 356 QRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRT--RQVSQRGERERRHH 413
Query: 412 LPHEDPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGNGHR 540
P R R R R H G A+ R + G R
Sbjct: 414 -PGVAICRYRTRQVSQRGKRERRHHPGVAICRYRTRQTGESTR 455
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 240 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 374
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 243 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 341
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 243 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 347
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 591 SSLSETKDSVAQRLSSNPRSWGMEACGIHET 683
S ++ TKDS+ + P W E C +H T
Sbjct: 2193 SGVTGTKDSLLDKFKPKPGEWDCEMCLVHNT 2223
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 214 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 360
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064)
Length = 265
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Frame = +1
Query: 349 RRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRS--*HQGEAVLRRS*LR 522
+R R +H + +S S P R + + R H HR + + S H+ + R R
Sbjct: 159 QRERRLHKHSSPSISPSPPRRQKYSNGQSDRKGKHRHRDSSSPSPPRHRSRSPFRNGNKR 218
Query: 523 AGNGHRCIQQLPREVLRTSRRSGHHYRKRKIPLPR 627
G +Q R V KR++P PR
Sbjct: 219 KGFPTHRNKQRSRSVSPVQSGQASQVMKRRVPSPR 253
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 351
G P ED D + ++ R S + R+++ + R R H R
Sbjct: 82 GGPSRHNNASEDSFDSGEEEKRNKNSARKMSPINGHKSSRKSRHKSDKKERASRKRRHSR 141
Query: 352 RIRTPPRHPASGLS--RSRPHRL-PHEDP 429
P RHP+ S R R RL H P
Sbjct: 142 SESPPVRHPSGSQSGDRQRERRLHKHSSP 170
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 553 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 639
LPR ++R HY++ +PLPRG P
Sbjct: 132 LPRGGSPLTKRRESHYQEEGVPLPRGGSP 160
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 553 LPREVLRTSRRSGHHYRKRKIPLPRGSLP 639
LPR ++R HY++ +PLPRG P
Sbjct: 154 LPRGGSPLTKRRESHYQEEGVPLPRGGGP 182
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 276 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 377
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +3
Query: 225 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 374
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 495 SCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSV 620
SCA S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 179 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 307
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 237 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 374
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 249 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 386
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 28.7 bits (61), Expect = 4.7
Identities = 41/138 (29%), Positives = 53/138 (38%), Gaps = 12/138 (8%)
Frame = +1
Query: 238 ARHVRRHP-SRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSR---- 402
ARH RH +R + HR R GL R + H RIR L+R R
Sbjct: 1227 ARHRIRHGLARHRTRHGLARHRIRHGLARHRIRHGLARHRIRHGLXXXXHVLARHRIRHG 1286
Query: 403 --PHRLPHE-DPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGNG-HRCIQQLPREVL 570
HR+ H HR R + HR + H+ L R +R G HR L R +
Sbjct: 1287 LARHRIRHGLARHRIRHGLARHRIRHGLALHRIRCGLARHTIRRGLARHRTRHGLARHTI 1346
Query: 571 R---TSRRSGHHYRKRKI 615
R T R+ H + I
Sbjct: 1347 RHGLTRHRTRHGLARHTI 1364
Score = 27.9 bits (59), Expect = 8.2
Identities = 36/114 (31%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Frame = +1
Query: 238 ARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLP 417
ARH RH V + HR R GL R + H RIR GL+R HR+
Sbjct: 1263 ARHRIRH-GLXXXXHVLARHRIRHGLARHRIRHGLARHRIR-------HGLAR---HRIR 1311
Query: 418 HE-DPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAG-NGHRCIQQLPREVLR 573
H HR R + H + H+ L R +R G HR L R +R
Sbjct: 1312 HGLALHRIRCGLARHTIRRGLARHRTRHGLARHTIRHGLTRHRTRHGLARHTIR 1365
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 279 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 383
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 178 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRI 357
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 358 RTPPRHPASGLSRSR 402
+T + P+ +R++
Sbjct: 707 QTHSQ-PSQATARTQ 720
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 488 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 628
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 255 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 398
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 225 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 377
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 229 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRAHLRRIRT-PPRHPASGLSR 396
I H++ RH S+ L R R HR + RR + H ++L R R P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 397 SRPH 408
+PH
Sbjct: 1648 GKPH 1651
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 252 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 374
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 330 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 157
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 156 G 154
G
Sbjct: 147 G 147
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 276 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 395
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 208 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRH 375
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 331 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 432
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 219 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 371
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0)
Length = 893
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 589 LTVGKFVRLLEGAAGCSGGHF 527
+TVGK + L+ G AG GHF
Sbjct: 366 MTVGKLIELIAGKAGVLEGHF 386
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 28.3 bits (60), Expect = 6.2
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Frame = -2
Query: 526 LLEVKSDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVATG*VQTQDGVGECVS-- 353
++ V V ++L V + G G + + + +D V + A G V GVG+
Sbjct: 16 VVSVMMVVLVMMLMVRDSDDGGVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDADGR 73
Query: 352 FVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHG 242
D GVGD G D GG GRV + G+ D G
Sbjct: 74 VSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVGDDAIG 114
>SB_41475| Best HMM Match : HSA (HMM E-Value=7.5)
Length = 195
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/76 (25%), Positives = 25/76 (32%)
Frame = +1
Query: 217 HVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSR 396
H + R H R RVR H YR HR H R+ + +
Sbjct: 119 HEYRVHRVHEYRVH--RVHEYRVRRVHEYRVHRVHEYRVHRVHEYRVHRVHEYRVHRVHE 176
Query: 397 SRPHRLPHEDPHRARL 444
R HR+ HR +
Sbjct: 177 YRVHRVHEYRVHRVHV 192
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 222 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 353
S+ ST+ P T KP + RP+ P + P + P P T+
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 225 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 380
KH T PP S + P P+S TP+ SP S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 501 ATSLLTSSRKWPPLH-PAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWG 656
AT+L T + W P H P +++L P +D A L + P+ WG
Sbjct: 242 ATTLGTKPQPWGPSHNPGDQAKTLGTKPQPSGPSHNPRDQ-ATTLGTKPKPWG 293
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 240 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 338
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 240 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 371
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 261 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 380
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 243 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 389
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,658,388
Number of Sequences: 59808
Number of extensions: 604928
Number of successful extensions: 2903
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 2285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2831
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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