Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0317
         (720 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ251368-1|CAB86193.1| 1150|Homo sapiens calcium channel, alpha ...    31   4.1  
AJ251367-1|CAB86192.1| 1143|Homo sapiens calcium channel, alpha ...    31   4.1  
AF042793-1|AAB96914.1| 1076|Homo sapiens alpha 2 delta calcium c...    31   4.1  
AF042792-1|AAB96913.1| 1145|Homo sapiens alpha 2 delta calcium c...    31   4.1  
AF040709-1|AAC70914.1| 1145|Homo sapiens putative tumor suppress...    31   4.1  
AB011130-1|BAA25484.1| 1145|Homo sapiens KIAA0558 protein protein.     31   4.1  
BC131805-1|AAI31806.1|  913|Homo sapiens CCDC46 protein protein.       30   9.6  
AK096929-1|BAC04901.1|  567|Homo sapiens protein ( Homo sapiens ...    30   9.6  

>AJ251368-1|CAB86193.1| 1150|Homo sapiens calcium channel, alpha
           2/delta subunit 2 protein.
          Length = 1150

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 468 TLIFTTKGHESIRKYPKSASERYFDKAKRQENRLIVTAADY 590
           ++I   KGH+ IR   KS  ERY D+  R    + + + +Y
Sbjct: 595 SMIDGNKGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNY 635


>AJ251367-1|CAB86192.1| 1143|Homo sapiens calcium channel, alpha
           2/delta subunit 2 protein.
          Length = 1143

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 468 TLIFTTKGHESIRKYPKSASERYFDKAKRQENRLIVTAADY 590
           ++I   KGH+ IR   KS  ERY D+  R    + + + +Y
Sbjct: 595 SMIDGNKGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNY 635


>AF042793-1|AAB96914.1| 1076|Homo sapiens alpha 2 delta calcium
           channel subunit isoform II protein.
          Length = 1076

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 468 TLIFTTKGHESIRKYPKSASERYFDKAKRQENRLIVTAADY 590
           ++I   KGH+ IR   KS  ERY D+  R    + + + +Y
Sbjct: 526 SMIDGNKGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNY 566


>AF042792-1|AAB96913.1| 1145|Homo sapiens alpha 2 delta calcium
           channel subunit isoform I protein.
          Length = 1145

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 468 TLIFTTKGHESIRKYPKSASERYFDKAKRQENRLIVTAADY 590
           ++I   KGH+ IR   KS  ERY D+  R    + + + +Y
Sbjct: 595 SMIDGNKGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNY 635


>AF040709-1|AAC70914.1| 1145|Homo sapiens putative tumor suppressor
           gene 26 protein alpha 2 delta calcium channel subunit
           protein.
          Length = 1145

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 468 TLIFTTKGHESIRKYPKSASERYFDKAKRQENRLIVTAADY 590
           ++I   KGH+ IR   KS  ERY D+  R    + + + +Y
Sbjct: 595 SMIDGNKGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNY 635


>AB011130-1|BAA25484.1| 1145|Homo sapiens KIAA0558 protein protein.
          Length = 1145

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 468 TLIFTTKGHESIRKYPKSASERYFDKAKRQENRLIVTAADY 590
           ++I   KGH+ IR   KS  ERY D+  R    + + + +Y
Sbjct: 595 SMIDGNKGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNY 635


>BC131805-1|AAI31806.1|  913|Homo sapiens CCDC46 protein protein.
          Length = 913

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 526 DADFGYFLMDSWPFVVKINVAHEPRRC 446
           DA+F +F++D  PFV+K+    E +RC
Sbjct: 14  DAEFDHFVVDMKPFVLKLPHRTERQRC 40


>AK096929-1|BAC04901.1|  567|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39610 fis, clone SKNSH2008777. ).
          Length = 567

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 526 DADFGYFLMDSWPFVVKINVAHEPRRC 446
           DA+F +F++D  PFV+K+    E +RC
Sbjct: 14  DAEFDHFVVDMKPFVLKLPHRTERQRC 40


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,380,238
Number of Sequences: 237096
Number of extensions: 2209262
Number of successful extensions: 4598
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4598
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)