Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0317
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81068-10|CAJ30226.1| 258|Caenorhabditis elegans Hypothetical p... 29 3.3
Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical pr... 29 3.3
U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily ass... 29 3.3
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 29 3.3
AC024844-5|AAK29953.1| 156|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 394 HWHEHCFLCSMCKI 407
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 431 HWHEHCFLCSMCKI 444
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 431 HWHEHCFLCSMCKI 444
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 339 HWHEHCFLCSMCKI 352
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 394 HWHEHCFLCSMCKI 407
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 431 HWHEHCFLCSMCKI 444
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 431 HWHEHCFLCSMCKI 444
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 339 HWHEHCFLCSMCKI 352
>Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical
protein F25H5.1e protein.
Length = 454
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 261 HWHEHCFLCSMCKI 274
>Z81068-10|CAJ30226.1| 258|Caenorhabditis elegans Hypothetical
protein F25H5.1d protein.
Length = 258
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 65 HWHEHCFLCSMCKI 78
>Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical
protein F33H1.4 protein.
Length = 1385
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 492 HESIRK-YPKSASERYFDKAKRQENRLIVTAADYPRTPSH--TRASYR*RPRHILIDPSH 662
HE + K KS ER D+ + QE+ + A P P+H +A+ R RP + + P H
Sbjct: 220 HEVVEKDVVKSVIERDRDEDQEQEHASVADPAGPPPAPAHLANKANSRGRPANPI--PPH 277
Query: 663 R 665
R
Sbjct: 278 R 278
>U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily
assigned gene nameprotein 327, isoform a protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CFVC+ C +
Sbjct: 155 HWHPDCFVCQHCGV 168
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 29.1 bits (62), Expect = 3.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI 331
HWH CF+C C I
Sbjct: 431 HWHEHCFLCSMCKI 444
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 372 HWHSLCFVCKFCSI*SI*RVNAMQWRTDFVWSECQECIKDDLM 244
HWH+ CF+C C+ + + TD C EC K LM
Sbjct: 614 HWHNDCFICAQCTT----SLVGKGFITDGHEILCPECAKARLM 652
>AC024844-5|AAK29953.1| 156|Caenorhabditis elegans Hypothetical
protein Y65B4A.7 protein.
Length = 156
Score = 27.9 bits (59), Expect = 7.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 372 HWHSLCFVCKFC 337
HWH CF CK C
Sbjct: 108 HWHMACFKCKAC 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,501,564
Number of Sequences: 27780
Number of extensions: 349601
Number of successful extensions: 858
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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