Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0314
         (571 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    42   0.013
UniRef50_Q97IC2 Cluster: Probable serine/threonine-protein kinas...    33   3.6  
UniRef50_Q9HBQ9 Cluster: Putative uncharacterized protein; n=1; ...    33   6.2  
UniRef50_A4VCZ5 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  
UniRef50_A2FI35 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 41.5 bits (93), Expect = 0.013
 Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
 Frame = +1

Query: 139 SNP*TQSTEFLAGS*----LRSGGRFCEELLLLGLVFITGGRTS 258
           +NP TQ  +FLAGS      RS GRFCE LLLLGLV     R S
Sbjct: 68  TNPKTQPMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLS 111



 Score = 38.3 bits (85), Expect = 0.13
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -1

Query: 478 IMLRWVNELTAHFMLSGYRSP 416
           ++LRWV+ELTAH +LSGY SP
Sbjct: 155 LLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q97IC2 Cluster: Probable serine/threonine-protein kinase
           CA_C1728; n=1; Clostridium acetobutylicum|Rep: Probable
           serine/threonine-protein kinase CA_C1728 - Clostridium
           acetobutylicum
          Length = 657

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 305 KAEIVRVVVPTRADSQEVLPPVMNTSPNKSNSSQNLPPDRNHDPAR 168
           K   V +V+  R +S  V PP  N      N +QN  PD NHD ++
Sbjct: 567 KGTTVTIVIG-RFNSTAVQPPNNNNGNGNQNQNQNKTPDTNHDDSK 611


>UniRef50_Q9HBQ9 Cluster: Putative uncharacterized protein; n=1;
           Homo sapiens|Rep: Putative uncharacterized protein -
           Homo sapiens (Human)
          Length = 353

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 480 KKKKKNSRGGPVPNS 524
           KKKKKNSRGGPVP +
Sbjct: 46  KKKKKNSRGGPVPGN 60


>UniRef50_A4VCZ5 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1272

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -3

Query: 278  PTRADSQEVLPPVMNTSPNKSNSSQNLPPDRNHDPARNS 162
            P +A    V PPV+N +  KS S+ N PP R + P +N+
Sbjct: 1060 PVKAGGM-VPPPVVNQNLVKSESNSNPPPPRPNQPVQNT 1097


>UniRef50_A2FI35 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1307

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = -3

Query: 305  KAEIVRVVVPTRADSQEVLPPVMNTSPNKSNSS-----QNLPPDRNHDPARNSVD 156
            KA   + +  + +  +E LPP     P K+ SS     + LPP +  +PA+N +D
Sbjct: 1059 KAAPAKKISSSSSSEEENLPPPKKPEPKKALSSSSSDEEELPPPKKQEPAKNVLD 1113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,815,055
Number of Sequences: 1657284
Number of extensions: 10468094
Number of successful extensions: 21926
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21912
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)