Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0314
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   5.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   5.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.8  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 273 GRYYHPDYFCLKSVM 317
           G +Y PDYF  K+++
Sbjct: 128 GSFYQPDYFIDKNIV 142


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 273 GRYYHPDYFCLKSVM 317
           G +Y PDYF  K+++
Sbjct: 128 GSFYQPDYFIDKNIV 142


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 273 GRYYHPDYFCLKSVM 317
           G +Y PDYF  K+++
Sbjct: 128 GSFYQPDYFIDKNIV 142


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 273 GRYYHPDYFCLKSVM 317
           G +Y PDYF  K+++
Sbjct: 128 GSFYQPDYFIDKNIV 142


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 273 GRYYHPDYFCLKSVM 317
           G +Y PDYF  K+++
Sbjct: 128 GSFYQPDYFIDKNIV 142


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 431 WLPEPIDINEVNTPPTLRYK 372
           WL  P  +    TP +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 506 PPRVFFFFFYNA*MGERAHSPLYVKWL 426
           PP V  F  +       +  P+Y KWL
Sbjct: 562 PPLVIPFLLFGGFFLNVSSIPIYFKWL 588


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 506 PPRVFFFFFYNA*MGERAHSPLYVKWL 426
           PP V  F  +       +  P+Y KWL
Sbjct: 562 PPLVIPFLLFGGFFLNVSSIPIYFKWL 588


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 423 GAHRHQRGKYATH 385
           G+H HQ G  A H
Sbjct: 12  GSHHHQSGSVAGH 24


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +2

Query: 509 PGTQFAPIVSRITIHWPSFYN 571
           P   + P+ +   + +PS+YN
Sbjct: 346 PNQIYQPVTNLTNLTYPSYYN 366


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 377 YKF*GLKYSYNGC 339
           Y F G  Y Y GC
Sbjct: 17  YPFQGTTYKYTGC 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,021
Number of Sequences: 336
Number of extensions: 2521
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)