Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0313
         (582 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BSM1 Cluster: Chromosome undetermined scaffold_125, w...    33   3.7  
UniRef50_A7CWQ5 Cluster: Putative uncharacterized protein precur...    33   4.9  

>UniRef50_A0BSM1 Cluster: Chromosome undetermined scaffold_125,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_125,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 544

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 1   LIYRKLCFLEFSRFRKCVLFFPLNIRLLGDRLAQH 105
           L + KL  L FSRF+  V  +P  ++ +G+R+A+H
Sbjct: 423 LAFNKLNDLTFSRFKMNVFHYPDGLKYMGNRIAEH 457


>UniRef50_A7CWQ5 Cluster: Putative uncharacterized protein
           precursor; n=2; Opitutaceae bacterium TAV2|Rep: Putative
           uncharacterized protein precursor - Opitutaceae
           bacterium TAV2
          Length = 854

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = -3

Query: 571 EKPFKSNVESVAYFIFHSG--EDCVYLANL--YLTPVIESPFWIEPS 443
           EKPF +  E + YF+F  G   D  YL  L   L  ++E P W  P+
Sbjct: 306 EKPFAARTERLGYFLFAEGWANDGRYLPALERELAAILEEPTWCAPA 352


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,849,579
Number of Sequences: 1657284
Number of extensions: 9706866
Number of successful extensions: 22292
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22287
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)