Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0313
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.           25   2.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   5.5  

>Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +2

Query: 296 LFAIVTCRHFNFNKTEHRHARPICQPSLLLPA*NHTVSLNVTMGGLGVDRGLNP 457
           L A+V C   +     H+   P   P  L P  +HTVS +  +GG  +D    P
Sbjct: 12  LLAVVACAQAH---ASHQRRVPYPLPRFL-PRPHHTVSNHRIVGGFEIDVAETP 61


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 394  KSYSITQRNYGRARSRPRAQSKRGFRLQG*DINSRDKRSPL 516
            +S S +Q + G  RSR R++S+ G R +    +   + SP+
Sbjct: 1149 RSRSGSQASRGSRRSRSRSRSRSGSRSRSRSGSGSRQASPI 1189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,699
Number of Sequences: 2352
Number of extensions: 10259
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)