Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0313
         (582 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.41 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.9  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 11/50 (22%), Positives = 27/50 (54%)
 Frame = +3

Query: 255 KFKYYPARYSVPDRFLRSSRVDILILIKLNIGTPDLFVNLLYFCRRKIIQ 404
           K  +YP    + ++FL   +     L  +++ +  +F+N+L F ++K ++
Sbjct: 305 KVNFYPNNQDI-EKFLNYLKRGGKTLTSISVESNTMFINILKFLKQKYVK 353


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 499 LANLYLTPVIESPFWIEPSVDS 434
           L  L  TPV+ S F   PS+DS
Sbjct: 525 LMKLETTPVLPSRFQSHPSIDS 546


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 305 IVTCRHFNFNKTEHRHARP 361
           ++  RH N   TE  + RP
Sbjct: 224 VIASRHRNLEATESENVRP 242


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,544
Number of Sequences: 438
Number of extensions: 3326
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)