Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0310
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       30   0.013
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   3.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.5  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   4.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.5  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   7.8  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 30.3 bits (65), Expect = 0.013
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 295 YKIEDPHTGDLKSQHETRDGDVVKGYYSLHEADGSIRVVEYSAD 426
           Y +E  +    + +  T DG +V  Y  +   DGS+R V Y+AD
Sbjct: 195 YVVEGRNYRKYRVEERTSDGFIVGEYGVVSHDDGSLRGVRYTAD 238


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 295 IQMHIWDEHHN 263
           + +HI+D HHN
Sbjct: 86  VHLHIYDMHHN 96


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 295 IQMHIWDEHHN 263
           + +HI+D HHN
Sbjct: 403 VNLHIYDLHHN 413


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +1

Query: 244 DQPHHEDYDAHPKYAFEYKIEDPHTGDLKSQHETRDGDVVKGYYSLH 384
           + P+ E+Y  H  Y   Y+ E P+       H + DG  V    + H
Sbjct: 364 NHPNSENYINHQNYVQGYQGEHPNYNHY-GYHYSGDGGEVAHLPNTH 409


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
 Frame = -2

Query: 337 VGSSGPQCEGLRF----CIQMHIWDEHHN 263
           +G     C GL+        +HI+D HHN
Sbjct: 86  LGEDFVTCNGLKLPKSTITHLHIYDLHHN 114


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 295 IQMHIWDEHHN 263
           + +HI+D HHN
Sbjct: 403 VNLHIYDLHHN 413


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +1

Query: 244 DQPHHEDYDAHPKYAFEYKIEDPHTGDLKSQHETRDGDVVKGYYSLH 384
           + P+ E+Y  H  Y   Y+ E P+       H + DG  V    + H
Sbjct: 312 NHPNSENYINHQNYVQGYQGEHPNYNHY-GYHYSGDGGEVAHLPNTH 357


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 295 IQMHIWDEHHN 263
           +Q+HI+D H+N
Sbjct: 87  LQLHIYDLHYN 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,041
Number of Sequences: 336
Number of extensions: 2599
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)