Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0309
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.24 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   1.7  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    25   2.9  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    25   2.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   8.9  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = -1

Query: 567  SRSHRDASGRSRSVDFDQHGSTAGGTSKRRRENRYSISE*REGRAQDS 424
            SRS   +  RSRS    + GS AG  S+ R  +R S S  R G A+ S
Sbjct: 1069 SRSGSGSRSRSRSGSGSRAGSRAGSGSRSRSRSR-SRSRSRSGSAKGS 1115


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 586 WYRKYYEPLPQRCFRSFK 533
           W R++Y P+ QR   SF+
Sbjct: 785 WLRRFYRPVVQRVISSFR 802


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 357 PTCRPAYLYPSHVDSSPQFDYDSEKVVTRRTNVFM 253
           PT +P YL P   D +PQ     E+V+     V M
Sbjct: 41  PTVQPGYLRPLIPDEAPQQPEKWEEVMADVERVIM 75


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 357 PTCRPAYLYPSHVDSSPQFDYDSEKVVTRRTNVFM 253
           PT +P YL P   D +PQ     E+V+     V M
Sbjct: 72  PTVQPGYLRPLIPDEAPQQPEKWEEVMADVERVIM 106


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 62  VNNDCLDKFRIGDVLY 15
           +NN C+++   G++LY
Sbjct: 436 INNGCMEEITSGEILY 451


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,371
Number of Sequences: 2352
Number of extensions: 12748
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)