Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0308
         (626 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF114152-1|AAD12541.1| 2098|Drosophila melanogaster rough deal p...    30   2.2  
AE014297-4759|AAF57162.2| 2089|Drosophila melanogaster CG1569-PA...    30   2.2  

>AF114152-1|AAD12541.1| 2098|Drosophila melanogaster rough deal
            protein protein.
          Length = 2098

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 464  IVYPSNVRDERKIRSHSYPEEMQFEALYHHTAAPKDLRVDL 342
            ++Y   + DE+ +R    P E+  +ALYHH    K  +VD+
Sbjct: 1706 LLYVYGLTDEKLLRQVENPTEL-IQALYHHELILKSSKVDI 1745


>AE014297-4759|AAF57162.2| 2089|Drosophila melanogaster CG1569-PA
            protein.
          Length = 2089

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 464  IVYPSNVRDERKIRSHSYPEEMQFEALYHHTAAPKDLRVDL 342
            ++Y   + DE+ +R    P E+  +ALYHH    K  +VD+
Sbjct: 1707 LLYVYGLTDEKLLRQVENPTEL-IQALYHHELILKSSKVDI 1746


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,830,729
Number of Sequences: 53049
Number of extensions: 543749
Number of successful extensions: 1604
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1604
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)