Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0308
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   5.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   5.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.8  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 351 CRPAYLYPSHVDSSPQFDYDSEKVVTRRTNV 259
           CR +YL   H+     +D D  K++     V
Sbjct: 94  CRESYLKERHITLHHCYDADGIKLMNEENGV 124


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 351 CRPAYLYPSHVDSSPQFDYDSEKVVTRRTNV 259
           CR +YL   H+     +D D  K++     V
Sbjct: 94  CRESYLKERHITLHHCYDADGIKLMNEENGV 124


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +2

Query: 188 VHDIYKEIIYKCV 226
           ++++Y  ++YKCV
Sbjct: 160 INELYPGVVYKCV 172


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 205 LVNIMDEIPNRRIVKNILLLILS 137
           LV ++DE P+ R    +LLL L+
Sbjct: 870 LVEVLDEFPSVRPFAPLLLLHLT 892


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 51  IVIYIMVFYCSGIF 92
           I+IY ++ Y SG+F
Sbjct: 323 IIIYTILTYMSGVF 336


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = -3

Query: 609 NHSGPQQWYRKYYEPLPQRCFRSXQGPSISTSTALPPGGT 490
           N  G  + +  ++EP+P+  F        S +    P GT
Sbjct: 252 NRLGRVKRFINWHEPIPEAYFPKLDSLVASRTWPFRPSGT 291


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,960
Number of Sequences: 438
Number of extensions: 3867
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)