Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0307
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0582 - 4752576-4752786,4752955-4753037,4753324-4753530,475... 33 0.20
09_06_0001 + 20114108-20115686,20115813-20115928,20116416-201173... 32 0.34
02_01_0477 + 3431509-3431551,3432243-3432319,3432417-3432542,343... 32 0.34
02_05_0819 - 32014236-32016059 31 1.1
05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241 30 1.4
08_01_0475 - 4185534-4186047,4187437-4187708,4188032-4188979,419... 30 1.8
03_02_0662 - 10250235-10250433,10250692-10253105 30 1.8
02_02_0270 + 8431503-8431830,8431961-8432149,8434288-8434412,843... 29 2.4
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 29 3.2
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 29 3.2
05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376... 28 5.6
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 5.6
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 28 5.6
02_05_0606 + 30314102-30314611 28 5.6
01_06_1032 - 33950477-33950704,33951122-33951311,33952714-33953333 28 5.6
09_02_0111 - 4386913-4387295,4388000-4388078,4389553-4390659 28 7.4
03_02_0985 - 12961787-12961984,12963177-12963337,12965332-129654... 28 7.4
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 27 9.8
08_02_1582 + 28007169-28007188,28007278-28007312,28007945-280081... 27 9.8
07_03_1641 + 28318256-28318309,28318420-28318458,28318544-283185... 27 9.8
01_06_0322 + 28472680-28473053,28474434-28474470,28474578-284748... 27 9.8
01_05_0426 + 22042215-22042595,22044846-22045688 27 9.8
>12_01_0582 -
4752576-4752786,4752955-4753037,4753324-4753530,
4755128-4755207,4756853-4756998,4757088-4757719
Length = 452
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +1
Query: 253 EFQKALASKQPAYDLTMKTGKHLKDKAPKGDENPLKTMITDMKTKWTTVCSKAVDRQRKL 432
EF++ +A + + + + L+ A K + L T+I D+ K T + VD++RKL
Sbjct: 84 EFRRLMADHRALAEERLALHRELQ--AGKDEVRHLNTIIADISAKKETYIGELVDKRRKL 141
Query: 433 EEALLYSGQFKDAMSAL 483
E L + +D + L
Sbjct: 142 EAELRANESLRDEIVQL 158
>09_06_0001 +
20114108-20115686,20115813-20115928,20116416-20117394,
20118820-20119082
Length = 978
Score = 32.3 bits (70), Expect = 0.34
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +1
Query: 172 EEQLDQLNSEATVND-PDKIKQRLNKHREFQKALASKQPAYDLTMKTGKHL--KDKAPKG 342
+E +LN + N+ PD I ++ Q ++ Y L +K G H+ KD+ +
Sbjct: 656 DEVFKRLNEQKKKNEKPDLISLFEDQKIMKQDLEEIRKRLYMLELKEGFHMEEKDEPIQE 715
Query: 343 DENPLKTMITDMKTKW-TTVCSKAVDRQRKLEEALLYSG 456
D+ ++T+ MK KW T V + +DR L+ SG
Sbjct: 716 DDQVVETIQKYMKQKWYTEVMYRFIDRSYFQHITLIDSG 754
>02_01_0477 +
3431509-3431551,3432243-3432319,3432417-3432542,
3432638-3432715,3432797-3432952,3433044-3433140,
3433595-3433817,3440445-3440760,3440895-3441390,
3441485-3441651
Length = 592
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/89 (22%), Positives = 39/89 (43%)
Frame = +1
Query: 163 NETEEQLDQLNSEATVNDPDKIKQRLNKHREFQKALASKQPAYDLTMKTGKHLKDKAPKG 342
N T + + +ND ++I+ + + +K++ K+ + K K K K+ +
Sbjct: 482 NATNNAVVEGQQHGNLNDEEEIEDPEQANTKGRKSIRQKRLVEKIMDKECKKYKGKSGQS 541
Query: 343 DENPLKTMITDMKTKWTTVCSKAVDRQRK 429
+EN LKT T + T C +R+
Sbjct: 542 NENQLKTKRTSNVAQGGTACEMQPKPKRR 570
>02_05_0819 - 32014236-32016059
Length = 607
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 517 EGDAPVHGDLDTVMALIEQHKQFEEDLHFARAADAVRHQDRP 642
+GD+ V+GD D + + + +F+ D F+ A++ +DRP
Sbjct: 501 DGDSDVYGDADEQLEKVMKTDRFKPDKGFSGASERSGKRDRP 542
>05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241
Length = 1445
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +1
Query: 61 RVVSKSAER-TRALDHGFKEAKEFSDMWNNLMNWLNETEEQLDQLNSEATVNDPDKIKQR 237
R S A+ T +D ++ EF+D+ N+++W E E + D N +D D
Sbjct: 301 RAYSNGADLDTNGVDWEAEDEMEFADLDTNVVDWEAEDEMEFDDDNDNDADDDGDNFGGD 360
Query: 238 LNK-HREFQKALASKQPAYDLTMKTGKHLKDKAPKGDENPLK 360
++ + Q SK DL + ++ + P DE +K
Sbjct: 361 ADEGDKSVQMHDFSKVETQDL-VSHNVNVSEVRPHEDEEAIK 401
>08_01_0475 -
4185534-4186047,4187437-4187708,4188032-4188979,
4190096-4190387,4190486-4191357,4192298-4192354,
4192391-4192504,4192966-4193595
Length = 1232
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 244 KHREFQKALASKQPAYDLTMKT-GKHLKDKAPKGDENPLKTMITDMKTKWTTV 399
KH QK S + ++T++ H DKA G++ ++ +TKW T+
Sbjct: 190 KHARLQKMTYSSKMKVEMTVQVYSLHKSDKAKTGEDPYIQRKDIMKETKWVTI 242
>03_02_0662 - 10250235-10250433,10250692-10253105
Length = 870
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 289 YDLT---MKTGKHLKDKAPKGDENPLKTMITDMKTKWTTVCSKAVDRQRKLEEALLYS 453
YDL M+T L A + DE P+ + W+TVC + + RQ + +E+ ++S
Sbjct: 251 YDLLEPYMQTIFELTSNAARVDEEPVALQAVEF---WSTVCDEEIARQEESKESGVFS 305
>02_02_0270 +
8431503-8431830,8431961-8432149,8434288-8434412,
8434527-8434703,8434798-8434871,8434978-8435713
Length = 542
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 118 AKEFSDMWNNLMNWLNETEEQLDQLNSEATVNDPDK------IKQRLNKHREFQKALASK 279
AK S N L+ L T E+L +L E T + + IK+ H+E QKALA +
Sbjct: 360 AKAASTEVNRLIAELTATNEKLSKLKEELTTANTNNESLRLLIKENSEMHQEGQKALAEE 419
Query: 280 Q 282
+
Sbjct: 420 K 420
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/105 (23%), Positives = 46/105 (43%)
Frame = +1
Query: 1 QKQDVILIKNLLVSVQHRWERVVSKSAERTRALDHGFKEAKEFSDMWNNLMNWLNETEEQ 180
+ V + L+ Q ER++S A+ R ++ KE +E L + E + +
Sbjct: 22 RNSQVAFLSPYLLKSQDLAERILSLEADLNRQSENTLKEKEEHEKTRTELE--VKEKQLE 79
Query: 181 LDQLNSEATVNDPDKIKQRLNKHREFQKALASKQPAYDLTMKTGK 315
++ N TV + +R ++ E Q+ +Q +L MK GK
Sbjct: 80 EERQNHTLTVQRHGEELERQSRELERQREELERQ-GRELKMKDGK 123
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 29.1 bits (62), Expect = 3.2
Identities = 26/118 (22%), Positives = 52/118 (44%)
Frame = +1
Query: 58 ERVVSKSAERTRALDHGFKEAKEFSDMWNNLMNWLNETEEQLDQLNSEATVNDPDKIKQR 237
+ + S++ R ALD E + +++ NNL +++ +E+L++ TV+ + +
Sbjct: 643 KELYSEAKTRLEALDKKDAERRRTAELKNNLESYIYSMKEKLEENTEILTVSTEQERESF 702
Query: 238 LNKHREFQKALASKQPAYDLTMKTGKHLKDKAPKGDENPLKTMITDMKTKWTTVCSKA 411
K E Q L D K D+ K +P+ ++++K + T C A
Sbjct: 703 AEKLNEVQDWL--YMDGEDAQANEFKERLDQL-KAIGDPILFRLSELKAR-PTACENA 756
>05_04_0124 + 18232961-18236636,18236810-18237288,18237549-18237629,
18238033-18238041,18238096-18238248
Length = 1465
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 500 FLSQSSSADMASLNCPEYSSASSSFRCLS 414
F Q + + L CP +SS +S RCLS
Sbjct: 1112 FGCQDTLTTLVILGCPSFSSLPASIRCLS 1140
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 500 FLSQSSSADMASLNCPEYSSASSSFRCLS 414
F Q + + L CP +SS +S RCLS
Sbjct: 1112 FGCQGTLTTLVILGCPSFSSLPASIRCLS 1140
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 621 CICCSREMQVLFELFMLFDQRHHGVQVAVHRRVSFQKLLLLFEPVQQRRHG 469
CI +M+VL + LF++ + Q A ++ QKL LLF P+ + G
Sbjct: 652 CIVQLLDMEVLSDPHQLFEELNKAKQAAASKK---QKLQLLFCPMSDQHPG 699
>02_05_0606 + 30314102-30314611
Length = 169
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 QHRWERVVS--KSAERTRALDHGFKEAKEFSDMWNNLMNWLNETEEQLDQLNSEATVNDP 219
+ R R++S +SA R+R ++ K+ S++W +++ + + LDQLN + D
Sbjct: 79 ERRRRRMISNRESARRSR-----MRKQKQLSELWAQVVHLRSTNRQLLDQLNH--VIRDC 131
Query: 220 DKIKQRLNKHREFQKAL 270
D++ + R+ Q L
Sbjct: 132 DRVTHENCQLRDEQAKL 148
>01_06_1032 - 33950477-33950704,33951122-33951311,33952714-33953333
Length = 345
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/78 (21%), Positives = 35/78 (44%)
Frame = +1
Query: 61 RVVSKSAERTRALDHGFKEAKEFSDMWNNLMNWLNETEEQLDQLNSEATVNDPDKIKQRL 240
R + + E RA++ +EAK + D W + M E +Q+ + S + + ++
Sbjct: 88 RAMDEEDEIFRAMERDNREAKAYVDSWGDRMRETCELLKQVREPGSRGSYLKDSEKQEMY 147
Query: 241 NKHREFQKALASKQPAYD 294
H+E + ++ A D
Sbjct: 148 RLHKEDPETYTVERLAKD 165
>09_02_0111 - 4386913-4387295,4388000-4388078,4389553-4390659
Length = 522
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -1
Query: 579 FMLFDQRHHGVQVAVHRRVSF--QKLLLLFEPVQQRRHGVF 463
F L+D HHG+ + H + + +L L+ +PV RRH +F
Sbjct: 86 FSLYDS-HHGLLLLRHHKCEYFNPRLFLVCDPV-SRRHALF 124
>03_02_0985 -
12961787-12961984,12963177-12963337,12965332-12965489,
12966015-12966105,12966715-12966752,12966994-12967154,
12967249-12968687,12968815-12969227,12969630-12970987,
12971089-12971454,12971533-12971696,12971748-12971820,
12972967-12973113
Length = 1588
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 229 KQRLNKHREFQKALASKQPAYDLTMKTGKHLKDKAPKG-DENPLKT 363
K +H+ K+ +S DLT K+ KH K K +G D + KT
Sbjct: 821 KSASERHKSKHKSRSSHSDGGDLTEKSKKHSKSKNRRGIDRDEHKT 866
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 325 DKAPKGDENPLKTMITDMKTKWTTVCSKAVDRQRKLEEALLYSGQFKDAMSA 480
DKA K + LK+ +TD++ K + ++ D + L EA + DA+ A
Sbjct: 396 DKASKVETETLKSQVTDLQAKVEKLETEKRDLEMALAEARVQLDASCDALMA 447
>08_02_1582 +
28007169-28007188,28007278-28007312,28007945-28008130,
28008783-28008962,28009290-28009474,28009593-28009688,
28009888-28009933,28010054-28010160,28010893-28010994,
28011080-28011614,28012296-28012366,28012747-28012830
Length = 548
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 KQDVILIKNLLVSVQHRWERVVSKSAERTRALDHGFKEAKEFSDMWNNLMNWLNETEEQL 183
K D +KNLL H+ E + + S +R + DH + + + Q
Sbjct: 360 KIDAPKLKNLLFEPPHQDELISNPSLKRPKRKDHPTHGPESNPQQQKKAKHIIGPESNQK 419
Query: 184 DQLNSEATVN-DPDKIKQRLNKHR 252
Q + TVN P + N HR
Sbjct: 420 QQKKVKHTVNPGPAASRSATNLHR 443
>07_03_1641 +
28318256-28318309,28318420-28318458,28318544-28318597,
28318653-28318780,28318993-28319044,28319211-28319309
Length = 141
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 455 DSSKTPCRRCWTGSKSNRSFWKETRLCTATW 547
+ K CRRC TG+ ++R ++ R+ +W
Sbjct: 67 EQQKCFCRRCRTGAPTSRHRSRQARMSYCSW 97
>01_06_0322 +
28472680-28473053,28474434-28474470,28474578-28474814,
28474891-28474938,28475263-28475661
Length = 364
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 217 PDKIKQRLNKHREFQKALASKQPAYDLTMKTGKHLKDKAPKGDENP 354
PD IK L K +SK ++TMK G KD P E P
Sbjct: 272 PDYIKH-LKKFVSSLGKKSSKPDLKEITMKEGASSKDSEPASSEKP 316
>01_05_0426 + 22042215-22042595,22044846-22045688
Length = 407
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -1
Query: 489 VQQRRHGVFELSRVQQRLFQFPLPVNSLRAHGCPFRLHIRYHCLQRVLV 343
++QR HG+ E V R + H CP R+ CL + L+
Sbjct: 122 IRQRSHGIPEAKGVGVRQVTSKVLEQEHHCHACPARMDATLVCLPQCLL 170
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.129 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,756,850
Number of Sequences: 37544
Number of extensions: 338409
Number of successful extensions: 1129
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
- SilkBase 1999-2023 -