Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0306
(614 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 28 0.054
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 27 0.095
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 27 0.095
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 27 0.095
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 27 0.095
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 27 0.095
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 27 0.095
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 27 0.095
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 27 0.17
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 24 0.88
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 1.2
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 24 1.2
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 1.2
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 1.5
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 23 1.5
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 23 2.7
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.7
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 21 8.2
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 21 8.2
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 28.3 bits (60), Expect = 0.054
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 12/126 (9%)
Frame = +2
Query: 200 SGLGTRYRKPSVPRSTLTPGTSRPGSRAGS---RAGSKPPSRHGSNLSL-DSTD---DAT 358
S GT Y P+ ST P P A + P HG ++ D T
Sbjct: 23 SSPGTDYYNPNA-NSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQPQRL 81
Query: 359 TPSRIPMRKVTNTKTSIARAAANASKLGVSTP-----NGSRPRTPTGYLTPASGRQRTPS 523
P+ + ++ + A + S GV++P NG+ PR+ TP++ S
Sbjct: 82 APTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSS 141
Query: 524 GSTTPV 541
G T+P+
Sbjct: 142 GLTSPL 147
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.095
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Frame = +2
Query: 200 SGLGTRYRKPSVPRSTLTPGTSRPGSRAGS---RAGSKPPSRHGSNLSLDSTDDATTPSR 370
S GT Y P+ ST P P A + P HG ++ P R
Sbjct: 23 SSPGTDYYNPNA-NSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQ-PQR 80
Query: 371 IPMRKVT--NTKT---SIARAAANASKLGVSTP-----NGSRPRTPTGYLTPASGRQRTP 520
+ + NT+T + + A + S GV++P NG+ PR+ TP++
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 521 SGSTTPV 541
SG T+P+
Sbjct: 141 SGLTSPL 147
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.095
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Frame = +2
Query: 200 SGLGTRYRKPSVPRSTLTPGTSRPGSRAGS---RAGSKPPSRHGSNLSLDSTDDATTPSR 370
S GT Y P+ ST P P A + P HG ++ P R
Sbjct: 23 SSPGTDYYNPNA-NSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQ-PQR 80
Query: 371 IPMRKVT--NTKT---SIARAAANASKLGVSTP-----NGSRPRTPTGYLTPASGRQRTP 520
+ + NT+T + + A + S GV++P NG+ PR+ TP++
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 521 SGSTTPV 541
SG T+P+
Sbjct: 141 SGLTSPL 147
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 27.5 bits (58), Expect = 0.095
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Frame = +2
Query: 200 SGLGTRYRKPSVPRSTLTPGTSRPGSRAGS---RAGSKPPSRHGSNLSLDSTDDATTPSR 370
S GT Y P+ ST P P A + P HG ++ P R
Sbjct: 23 SSPGTDYYNPNA-NSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQ-PQR 80
Query: 371 IPMRKVT--NTKT---SIARAAANASKLGVSTP-----NGSRPRTPTGYLTPASGRQRTP 520
+ + NT+T + + A + S GV++P NG+ PR+ TP++
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 521 SGSTTPV 541
SG T+P+
Sbjct: 141 SGLTSPL 147
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.095
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Frame = +2
Query: 200 SGLGTRYRKPSVPRSTLTPGTSRPGSRAGS---RAGSKPPSRHGSNLSLDSTDDATTPSR 370
S GT Y P+ ST P P A + P HG ++ P R
Sbjct: 23 SSPGTDYYNPNA-NSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQ-PQR 80
Query: 371 IPMRKVT--NTKT---SIARAAANASKLGVSTP-----NGSRPRTPTGYLTPASGRQRTP 520
+ + NT+T + + A + S GV++P NG+ PR+ TP++
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 521 SGSTTPV 541
SG T+P+
Sbjct: 141 SGLTSPL 147
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 27.5 bits (58), Expect = 0.095
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Frame = +2
Query: 200 SGLGTRYRKPSVPRSTLTPGTSRPGSRAGS---RAGSKPPSRHGSNLSLDSTDDATTPSR 370
S GT Y P+ ST P P A + P HG ++ P R
Sbjct: 23 SSPGTDYYNPNA-NSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQ-PQR 80
Query: 371 IPMRKVT--NTKT---SIARAAANASKLGVSTP-----NGSRPRTPTGYLTPASGRQRTP 520
+ + NT+T + + A + S GV++P NG+ PR+ TP++
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 521 SGSTTPV 541
SG T+P+
Sbjct: 141 SGLTSPL 147
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 27.5 bits (58), Expect = 0.095
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Frame = +2
Query: 200 SGLGTRYRKPSVPRSTLTPGTSRPGSRAGS---RAGSKPPSRHGSNLSLDSTDDATTPSR 370
S GT Y P+ ST P P A + P HG ++ P R
Sbjct: 23 SSPGTDYYNPNA-NSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQ-PQR 80
Query: 371 IPMRKVT--NTKT---SIARAAANASKLGVSTP-----NGSRPRTPTGYLTPASGRQRTP 520
+ + NT+T + + A + S GV++P NG+ PR+ TP++
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 521 SGSTTPV 541
SG T+P+
Sbjct: 141 SGLTSPL 147
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.095
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Frame = +2
Query: 200 SGLGTRYRKPSVPRSTLTPGTSRPGSRAGS---RAGSKPPSRHGSNLSLDSTDDATTPSR 370
S GT Y P+ ST P P A + P HG ++ P R
Sbjct: 23 SSPGTDYYNPNA-NSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMGDYTQLQ-PQR 80
Query: 371 IPMRKVT--NTKT---SIARAAANASKLGVSTP-----NGSRPRTPTGYLTPASGRQRTP 520
+ + NT+T + + A + S GV++P NG+ PR+ TP++
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 521 SGSTTPV 541
SG T+P+
Sbjct: 141 SGLTSPL 147
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 26.6 bits (56), Expect = 0.17
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Frame = +2
Query: 392 NTKT---SIARAAANASKLGVSTP-----NGSRPRTPTGYLTPASGRQRTPSGSTTPV 541
NT+T + + A + S GV++P NG+ PR+ TP++ SG T+P+
Sbjct: 46 NTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPL 103
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 24.2 bits (50), Expect = 0.88
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 456 FGVLTPSLLALAAARAIEVFVFVTFLMGMRDGVVAS 349
F LTP + L I+ F V F + + GVV S
Sbjct: 15 FFALTPRSIKLEKQTFIQKFYAVAFFLALSIGVVVS 50
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +2
Query: 446 STPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQ 556
+T N R P G T G+ R + + TP + +
Sbjct: 296 NTKNVRRKTNPAGVTTTTKGKVRAKTQNATPANNNDK 332
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -1
Query: 614 PACRTPTRPTACAVDETPRSAVPTAPASC 528
P C+ + +C V+ P A+ P C
Sbjct: 132 PDCKDESDENSCTVETDPNRALDCDPTQC 160
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +2
Query: 446 STPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQ 556
+T N R P G T G+ R + + TP + +
Sbjct: 296 NTKNVRRKTNPAGVTTTTKGKVRAKTQNATPANNNDK 332
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 23.4 bits (48), Expect = 1.5
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +1
Query: 1 PEHGSVQAAYASL*HKYSSINRTHHEGEGKNSSIGA 108
P+H S A+ + Y ++ HH + ++ GA
Sbjct: 45 PQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGA 80
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 23.4 bits (48), Expect = 1.5
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +1
Query: 1 PEHGSVQAAYASL*HKYSSINRTHHEGEGKNSSIGA 108
P+H S A+ + Y ++ HH + ++ GA
Sbjct: 45 PQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGA 80
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = -1
Query: 614 PACRTPTRPTACAVDETPRSAVPTAPASC 528
P C+ + +C V+ P A P C
Sbjct: 139 PDCKDESDENSCTVETDPNRAPDCDPTQC 167
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 264 LDPVLELDRGQDQNP 308
+D L L+RG+D+NP
Sbjct: 260 IDQSLALNRGRDENP 274
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.0 bits (42), Expect = 8.2
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 520 WGPLSSTSRRQVTGRRPRTGAVRRANPK 437
W + S R +GR PRT V++ K
Sbjct: 193 WVYCTRYSDRPSSGRSPRTRRVKKPGAK 220
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = +2
Query: 311 SRHGSNLSLDSTDDATTPSRIPMRKVTNTKTSI 409
+R G N D+ + + + +P T T+T++
Sbjct: 141 NRFGENEEADAASNVISSTPLPPTTSTTTRTTL 173
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,545
Number of Sequences: 336
Number of extensions: 3144
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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