Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0306
(614 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 27 0.19
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 24 1.4
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 2.4
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.5
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 7.2
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 7.2
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 9.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 9.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 9.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.6
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 26.6 bits (56), Expect = 0.19
Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Frame = +2
Query: 257 GTSRPGSRAGSRAGSKPPSRHGSNLSLDSTDDATTPSRIPMRKV-----TNTKTSIARAA 421
G + S +G+ A +PP+ SN ++ +TP+ + K+ + S+A A
Sbjct: 257 GNNEDSSDSGAAASDRPPASASSNEHEAESEHTSTPNFLSEAKIFPPTPGSFNFSMAALA 316
Query: 422 ANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPS 523
+ L V P P + G PS
Sbjct: 317 TEHTPLSVKFPGMGHGLQPPDLAGTSQGSAGLPS 350
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 413 RAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQTAVSRL 574
R + SK+ V G R +GY A G+QR T +S A+ L
Sbjct: 266 RISNEMSKVKVIDMTGPEQRILSGYHAIAGGQQRPDENVVTDKKSKVNFALPEL 319
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 517 GPLSSTSRRQVTG 479
GPLSST QVTG
Sbjct: 393 GPLSSTGLAQVTG 405
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 5.5
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 434 KLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQTAVS 568
+L S+P + T +TP+ RQR + P+ + + A S
Sbjct: 79 ELQADLAEASQPTSTTTSVTPSCRRQRYNIAAANPLLAEKLAAPS 123
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 5.5
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 392 NTKTSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTT-PVR 544
+T ++ A + L ++ G+ P TP+ + ++ +G+TT P R
Sbjct: 214 STPATVTTTGATTT-LPAASATGTGPATPSAVVATSNATAAMTTGTTTIPTR 264
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.2
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +2
Query: 227 PSVP-RSTLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDSTDDATTPSRIPMRKVTNTKT 403
PS+ RS L G+S PG+ PPS S ++ +T R K K
Sbjct: 381 PSIRNRSGLVSGSSTPGTGREHDPAKFPPSFRISRVAAYNTYGRNAGLRYRGPKQNKPKV 440
Query: 404 SIARAAANASKLGVSTP 454
+ AS L VS P
Sbjct: 441 -LHAIRRGASILRVSMP 456
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 159 VQEHQTRSVITKRRADLEQDTGSP 230
VQ+HQ +V + +D++ GSP
Sbjct: 255 VQQHQPVTVNRQLNSDVQPGHGSP 278
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 229 GLPVSCSKSARRFVITERV 173
G+PVSC R+ E+V
Sbjct: 57 GIPVSCISGRDRYECIEKV 75
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 229 GLPVSCSKSARRFVITERV 173
G+PVSC R+ E+V
Sbjct: 57 GIPVSCISGRDRYECIEKV 75
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 229 GLPVSCSKSARRFVITERV 173
G+PVSC R+ E+V
Sbjct: 57 GIPVSCISGRDRYECIEKV 75
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/35 (20%), Positives = 16/35 (45%)
Frame = +2
Query: 212 TRYRKPSVPRSTLTPGTSRPGSRAGSRAGSKPPSR 316
T+ ++P + + + P + PG + + P R
Sbjct: 2 TQQKQPIITQQSQQPSSGAPGPQPSPHQSPQAPQR 36
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,343
Number of Sequences: 438
Number of extensions: 3923
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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