Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0306
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g01280.1 68418.m00037 expressed protein 43 1e-04
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 40 0.001
At3g09000.1 68416.m01053 proline-rich family protein 37 0.012
At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapie... 36 0.016
At2g37960.1 68415.m04659 expressed protein 36 0.028
At2g40070.1 68415.m04923 expressed protein 35 0.037
At3g24550.1 68416.m03083 protein kinase family protein contains ... 35 0.049
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 34 0.086
At3g28790.1 68416.m03593 expressed protein 33 0.11
At3g08670.1 68416.m01007 expressed protein 33 0.15
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 32 0.26
At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5 ... 31 0.61
At4g30450.1 68417.m04324 glycine-rich protein 31 0.61
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 0.61
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 31 0.61
At3g04730.1 68416.m00509 auxin-responsive protein / indoleacetic... 31 0.80
At1g17440.2 68414.m02133 transcription initiation factor IID (TF... 30 1.1
At1g17440.1 68414.m02132 transcription initiation factor IID (TF... 30 1.1
At2g22720.3 68415.m02692 expressed protein 30 1.4
At2g22720.2 68415.m02691 expressed protein 30 1.4
At2g22720.1 68415.m02693 expressed protein 30 1.4
At3g17970.1 68416.m02286 chloroplast outer membrane translocon s... 29 1.9
At2g44790.1 68415.m05574 uclacyanin II strong similarity to ucla... 29 1.9
At5g52300.1 68418.m06491 low-temperature-responsive 65 kD protei... 29 2.4
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 29 2.4
At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18 pr... 29 2.4
At2g48130.1 68415.m06025 protease inhibitor/seed storage/lipid t... 29 2.4
At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product... 29 2.4
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 29 3.2
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 29 3.2
At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative stro... 29 3.2
At1g43970.1 68414.m05072 hypothetical protein 29 3.2
At5g65530.1 68418.m08245 protein kinase, putative contains prote... 28 4.3
At1g32810.1 68414.m04044 expressed protein 28 4.3
At5g64910.1 68418.m08165 expressed protein ; expression support... 28 5.7
At3g53320.1 68416.m05883 expressed protein 28 5.7
At3g22520.1 68416.m02846 expressed protein 28 5.7
At2g47350.2 68415.m05910 PAPA-1-like family protein / zinc finge... 28 5.7
At2g47350.1 68415.m05911 PAPA-1-like family protein / zinc finge... 28 5.7
At2g37070.1 68415.m04549 expressed protein 28 5.7
At1g72230.1 68414.m08351 plastocyanin-like domain-containing pro... 28 5.7
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 28 5.7
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 28 5.7
At3g46920.1 68416.m05092 protein kinase family protein similar t... 27 7.5
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 27 9.9
At5g21160.1 68418.m02528 La domain-containing protein / proline-... 27 9.9
At4g30710.2 68417.m04353 expressed protein contains Pfam domain,... 27 9.9
At4g30710.1 68417.m04352 expressed protein contains Pfam domain,... 27 9.9
At4g27910.1 68417.m04006 PHD finger protein-related / SET domain... 27 9.9
At3g28830.1 68416.m03597 expressed protein 27 9.9
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 27 9.9
At1g77390.1 68414.m09012 cyclin, putative similar to mitotic cyc... 27 9.9
At1g52500.2 68414.m05927 formamidopyrimidine-DNA glycolase famil... 27 9.9
At1g22880.1 68414.m02856 glycosyl hydrolase family 9 protein sim... 27 9.9
At1g13250.1 68414.m01538 glycosyl transferase family 8 protein c... 27 9.9
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 43.2 bits (97), Expect = 1e-04
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Frame = +2
Query: 212 TRYRKPSVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDSTDDATTPSRIPMRKVT 391
+ ++ S+ S+ G RP S + SR+ S+PP+ T + TP++ P +
Sbjct: 66 SEHQTTSLHSSSSVSGIRRPSSSSSSRSTSRPPT---------PTRKSKTPAKRPSTPTS 116
Query: 392 NTKTSIARAAANASKLGVSTPNGSRPR----TPTGYLTPASGRQRTPSGSTTPVRSGQQT 559
++ RA +S ST + SRP T T +T + R P+ ST +G T
Sbjct: 117 RATSTTTRATLTSSSTTSSTRSWSRPSSSSGTGTSRVTLTAARATRPTTSTDQQTTGSAT 176
Query: 560 AVSRLLRKPSDASES 604
+ +R +P A S
Sbjct: 177 S-TRSNNRPMSAPNS 190
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
Frame = +2
Query: 182 SDNEAASGLGTRYRKPSVPRSTLTP-----GTSRPGSRAGSRAGSKPPSRHGSNLSLDST 346
S N +++G G S P S+ TP +S P GS A S PS G S T
Sbjct: 42 SSNPSSTGFGFGSSVSSTPASSTTPSFGFGASSTPSFGFGSSASSSTPS-FGFGSSASVT 100
Query: 347 DDATTPSRIPMRKVTNTKTSIARAAANASKLGVSTPNGSRP---RTPTGYLTPASGRQRT 517
+TTPS T+ + +A S G ST N S +P G++T ++ T
Sbjct: 101 PASTTPS-------FGFGTAASSSAPAPSLFGSSTTNASSAAPGSSPFGFVTSSASSTAT 153
Query: 518 PSGS 529
PS S
Sbjct: 154 PSSS 157
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 36.7 bits (81), Expect = 0.012
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Frame = +2
Query: 224 KPSVPRSTLTPGTSRPGSRAGSRAGSKP--PSRHGSNLSLDSTDDATTPSRIPMRKVTNT 397
KP S++ G RP S SR+ S+P P+R ST T+ SR + +N+
Sbjct: 133 KPQTSSSSVA-GLRRPSSSGSSRSTSRPATPTRR-------STTPTTSTSRPVTTRASNS 184
Query: 398 KTS--IARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGST-TPVRSGQQTAVS 568
++S +RA A++ ST + PRT T + S R TP+ S P + + VS
Sbjct: 185 RSSTPTSRATLTAARATTST---AAPRTTT--TSSGSARSATPTRSNPRPSSASSKKPVS 239
Query: 569 R 571
R
Sbjct: 240 R 240
Score = 28.3 bits (60), Expect = 4.3
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Frame = +2
Query: 191 EAASGLGTRYRKPSVPRSTLTPGT-SRPGSRAGS-RAGSKPPSRHGSNLSLDSTDDATTP 364
EA L T V S PG S PGSR+GS G P S N S + +
Sbjct: 306 EAPPNLRTTLADRPVSASRGRPGVASAPGSRSGSIERGGGPTSGGSGNARRQSC--SPSR 363
Query: 365 SRIPMRKVTNTKTSIARAAANASKLGVSTPN 457
R P+ + T + R A AS G N
Sbjct: 364 GRAPIGNTNGSLTGV-RGRAKASNGGSGCDN 393
>At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapiens,
PIR:S53363
Length = 438
Score = 36.3 bits (80), Expect = 0.016
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = +2
Query: 275 SRAGSRAGSKPPSRHGSNLSLDSTDDATT--PSRIPMRKVTNT--KTSIARAAANASKLG 442
S+ S ++ P R S+ S T +T PS IP + ++ KT+ + A+AS
Sbjct: 91 SKLQSITTTRVPLRSESDPSSRPTRSGSTIRPSNIPTIRSSSVPKKTTTTQIQASAS--- 147
Query: 443 VSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASES 604
VS+P RT + LTP+S ++TPS ++TP R T+ + + DA S
Sbjct: 148 VSSPK----RTVSRSLTPSS--RKTPSPTSTPSRISTTTSTTPSFKTAGDAQRS 195
>At2g37960.1 68415.m04659 expressed protein
Length = 480
Score = 35.5 bits (78), Expect = 0.028
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +2
Query: 230 SVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDSTDDATTPSRIPMRKVTNTKTSI 409
S+ + +P S G+ + SR G K + + L+ + + TP + TN + +
Sbjct: 183 SITKKRKSPEVS-VGAPSVSRKGMKKIPQAANYLTFQTPSEMQTPLNNGV--ATNESSDL 239
Query: 410 ARAAANA--SKLGVSTPNGSR-PRTPTGYLTPASGRQRTPSGST 532
+ A K G S P+ S PRTP ++P S ++ TP+ T
Sbjct: 240 TSSVAKCLFDKSGTSPPSNSTCPRTPQQKVSPQSDKEVTPTNCT 283
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 35.1 bits (77), Expect = 0.037
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Frame = +2
Query: 194 AASGLGTRYRKPSVPRSTLTPGT-----SRPGSRAGSRAGSKPPSRHGSNLSLDSTDDAT 358
++ G G+R P+ STLT + S P SRA + ++P S S ++ +T T
Sbjct: 178 SSGGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRP-SLTNSRSTVSATTKPT 236
Query: 359 TPSR---IPMRKVTNTK----TSIARAAANASKLGVSTPNGSR-PRTPTGYLTPASGRQR 514
SR + ++T T TS AR+A + ++ ST S P T L+ ++ R
Sbjct: 237 PMSRSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARSS 296
Query: 515 TPSGSTTPVRSGQQTAVSRLLRKPSDASESGT 610
TP+ T S + S R+P ++ + T
Sbjct: 297 TPTSRPTLPPSKTISRSSTPTRRPIASASAAT 328
Score = 31.5 bits (68), Expect = 0.46
Identities = 42/139 (30%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Frame = +2
Query: 221 RKPSVPRSTLTPGTSRP----GSRAGSRAGSKP--------PSRHGSNLSLDSTDDATTP 364
R S+ S LTP S+P AGS S P PSR + LS + +T
Sbjct: 240 RSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARSSTPT 299
Query: 365 SR---IPMRKVTNTKTSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTT 535
SR P + ++ + T R A+AS +T N + + PA TPS +
Sbjct: 300 SRPTLPPSKTISRSSTPTRRPIASAS-AATTTANPTISQIKPSSPAPAK-PMPTPSKNPA 357
Query: 536 PVRSGQQTAVSRLLRKPSD 592
R+ T SR KPSD
Sbjct: 358 LSRAASPTVRSRPW-KPSD 375
Score = 28.3 bits (60), Expect = 4.3
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +2
Query: 308 PSRHGSNLSLDSTDDATTPSRIPMRKVTNTKTSIARAAANASKLGVSTPNGSRPRTPTGY 487
P+ S L+ ST+ A + + R+ T++ + + A+ P GSRP TPTG
Sbjct: 135 PATLTSRLANSSTESAAR-NHLTSRQQTSSPGLSSSSGASRRPSSSGGP-GSRPATPTGR 192
Query: 488 LTPASGRQRTPSGSTTPVRSGQQTA 562
+ + ++ ST R+ +A
Sbjct: 193 SSTLTANSKSSRPSTPTSRATVSSA 217
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 34.7 bits (76), Expect = 0.049
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
Frame = +2
Query: 227 PSVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDSTD---DATTPSRIPMRKVTNT 397
PS P T+ P A S + PS + S +ST + P +P +
Sbjct: 13 PSPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGS 72
Query: 398 KTSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQTAVSRLL 577
T + ++ + S P+ + P P +P G TPSGST R+ T S
Sbjct: 73 LTPPLPQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNTPSGSTP--RTPSNTKPS--- 127
Query: 578 RKPSDASE 601
PSD+S+
Sbjct: 128 -PPSDSSD 134
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 33.9 bits (74), Expect = 0.086
Identities = 30/121 (24%), Positives = 48/121 (39%)
Frame = +2
Query: 167 TPDSLSDNEAASGLGTRYRKPSVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDST 346
TP S+ + G P+ P ++P TS P GS S PS S +
Sbjct: 610 TPSSVVSPSTSLPAGQLGAPPATPSMVVSPSTSPPAGHLGS--PSDTPSSLVSPSTSPPA 667
Query: 347 DDATTPSRIPMRKVTNTKTSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSG 526
+PS P VT + + +A+ S + P+ S +P+ +P+ +PS
Sbjct: 668 GHLGSPSDTPSSVVTPSASPSTSPSASPSVSPSAFPSASPSASPSA--SPSVSPSASPSA 725
Query: 527 S 529
S
Sbjct: 726 S 726
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 33.5 bits (73), Expect = 0.11
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Frame = +2
Query: 227 PSVPR-STLTPGTSRPGSRAGSRAGSKPPSRHGS-NLSLDSTDDATTPSRIPMR-KVTNT 397
PS P ST TP T P + A S + S GS + S+ ++ + S V+ T
Sbjct: 293 PSTPTPSTPTPSTPTPSTPAPSTPAAGKTSEKGSESASMKKESNSKSESESAASGSVSKT 352
Query: 398 KTSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQ-RTPSGSTTPVRSGQQTAVS 568
K + ++ + K T +GS +P+G TP++ + S + +G + S
Sbjct: 353 KETNKGSSGDTYKDTTGTSSGSPSGSPSGSPTPSTSTDGKASSKGSASASAGASASAS 410
Score = 28.3 bits (60), Expect = 4.3
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 14/159 (8%)
Frame = +2
Query: 176 SLSDNEAASGL---GTRYRKPSVPRS----TLTPGTSRPGSRAGSRAGSKPPSRHGS-NL 331
S SDNE++S GT + S + T T + GS++ S A +K S S N
Sbjct: 203 SSSDNESSSNTKSQGTSSKSGSESTAGSIETNTGSKTEAGSKSSSSAKTKEVSGGSSGNT 262
Query: 332 SLDSTDDAT------TPSRIPMRKVTNTKTSIARAAANASKLGVSTPNGSRPRTPTGYLT 493
D+T ++ +P+ P +T T + + TP+ P TP T
Sbjct: 263 YKDTTGSSSGASPSGSPTPTPSTPTPSTPTPSTPTPSTPTP-STPTPSTPAPSTPAAGKT 321
Query: 494 PASGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASESGT 610
G + + +S ++A S + K + ++ +
Sbjct: 322 SEKGSESASMKKESNSKSESESAASGSVSKTKETNKGSS 360
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 33.1 bits (72), Expect = 0.15
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +2
Query: 170 PDSLSDNEAASGL-GTRYRKPSVPRSTLTPGTSRPGSRAGSRAGSKPP-SRHGSNLSLDS 343
P S S ++S T R S RS+ TP RPGS + S ++P S S +
Sbjct: 193 PSSPSSRSSSSARPSTPTRTSSASRSS-TPSRIRPGSSSSSMDKARPSLSSRPSTPTSRP 251
Query: 344 TDDATTPSRIPMRKVTNTKTSIARAAANASKLGVSTPNGSRPRTPT-GYLTPASGRQRTP 520
A++P+ I R + T R+ ++ S S P S R + G P+ R +P
Sbjct: 252 QLSASSPNIIASRPNSRPSTPTRRSPSSTSLSATSGPTISGGRAASNGRTGPSLSRPSSP 311
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 32.3 bits (70), Expect = 0.26
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Frame = +2
Query: 242 STLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDSTDDATTPSRIPMRKVTNTKTSIARAA 421
S ++P TS PGS A ++GS P S S + + +PS PM + +
Sbjct: 191 SAVSPATSPPGSMA-PKSGS-PVSPTTSPPAPPKSTSPVSPSSAPMTSPPAPMAPKSSST 248
Query: 422 ANASKLGVSTPNGS-RPRTPTGYL-TPASGRQRTPSGST--TPVRSGQQTAVSRLLRKPS 589
S +++P GS P++ + +P P GST +P S +A+ PS
Sbjct: 249 IPPSSAPMTSPPGSMAPKSSSPVSNSPTVSPSLAPGGSTSSSPSDSPSGSAMGPSGDGPS 308
Query: 590 DASESGTP 613
A + TP
Sbjct: 309 AAGDISTP 316
>At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5
family protein contains Pfam domain PF04153: NOT2 / NOT3
/ NOT5 family
Length = 843
Score = 31.1 bits (67), Expect = 0.61
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 167 TPDSLSDNEAASGLGTRYRKPSVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSNL-SLDS 343
TP S+ + AAS R T TS P S A PP ++G+ L S S
Sbjct: 254 TPLSMKSSLAASASQVRSISLPTHHQEKTEDTSLPDSSA-EMVPKTPPPKNGAGLHSAPS 312
Query: 344 TDDATTPS-RIPMRKVTNTKTSIA 412
T PS +P V+NT +++
Sbjct: 313 TPAGGRPSLNVPAGNVSNTSVTLS 336
>At4g30450.1 68417.m04324 glycine-rich protein
Length = 107
Score = 31.1 bits (67), Expect = 0.61
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2
Query: 194 AASGLGTRYRKPSVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGS 325
A SG G+ R S S+ + +S G AGS AGS SR GS
Sbjct: 60 AGSGSGSGSRSSSSSSSSSSSSSSGSGGSAGSSAGSFAGSRAGS 103
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.1 bits (67), Expect = 0.61
Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 3/114 (2%)
Frame = +2
Query: 227 PSVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDSTDDA-TTPSRIPMRKVTNTKT 403
P +T TPG S P S G PPS + S + TTPS P +
Sbjct: 468 PPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPS--PGGSPPSPSI 525
Query: 404 SIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGST--TPVRSGQQT 559
S + S T GS P +P+ TP+S P+ ST TP+ GQ +
Sbjct: 526 SPSPPITVPSPPSTPTSPGS-PPSPSS-PTPSSPIPSPPTPSTPPTPISPGQNS 577
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 215 RYRKPSVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDSTD 349
+ ++P PR L G R G R GS+P RH + DS D
Sbjct: 250 KQQQPRSPRRVLHQGMGTRVGRDGRRGGSRPHKRHRFTRTDDSDD 294
>At3g04730.1 68416.m00509 auxin-responsive protein / indoleacetic
acid-induced protein 16 (IAA16) identical to SP|O24407
Auxin-responsive protein IAA16 (Indoleacetic
acid-induced protein 16) {Arabidopsis thaliana}
Length = 236
Score = 30.7 bits (66), Expect = 0.80
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 544 PHRRRAARWGPLSSTSRRQVTGRRPRTGAVRRANPKLACIGGSTRDRS 401
P + + W P+ S + ++G++P TG N K + G+T S
Sbjct: 66 PAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSAS 113
>At1g17440.2 68414.m02133 transcription initiation factor IID
(TFIID) subunit A family protein similar to SP|Q16514
Transcription initiation factor TFIID 20/15 kDa subunits
(TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam
profile PF03847: Transcription initiation factor TFIID
subunit A
Length = 683
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Frame = +2
Query: 233 VPRSTLTPGTSR-PGSRAGSRAGSKP-PSRHGSNLSLDST--DDATTPSRIPMRKVTNTK 400
+P S+L+P + + P S A S P PS L + ++ + P VT T+
Sbjct: 5 IPSSSLSPKSLQSPNPMEPSPASSTPLPSSSSQQQQLMTAPISNSVNSAASPAMTVTTTE 64
Query: 401 TSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQ 556
+ + N S+ +S+PN + P G P+ PS S QQ
Sbjct: 65 GIVIQ---NNSQPNISSPNPTSSNPPIGAQIPSPSPLSHPSSSLDQQTQTQQ 113
>At1g17440.1 68414.m02132 transcription initiation factor IID
(TFIID) subunit A family protein similar to SP|Q16514
Transcription initiation factor TFIID 20/15 kDa subunits
(TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam
profile PF03847: Transcription initiation factor TFIID
subunit A
Length = 683
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Frame = +2
Query: 233 VPRSTLTPGTSR-PGSRAGSRAGSKP-PSRHGSNLSLDST--DDATTPSRIPMRKVTNTK 400
+P S+L+P + + P S A S P PS L + ++ + P VT T+
Sbjct: 5 IPSSSLSPKSLQSPNPMEPSPASSTPLPSSSSQQQQLMTAPISNSVNSAASPAMTVTTTE 64
Query: 401 TSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQ 556
+ + N S+ +S+PN + P G P+ PS S QQ
Sbjct: 65 GIVIQ---NNSQPNISSPNPTSSNPPIGAQIPSPSPLSHPSSSLDQQTQTQQ 113
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 29.9 bits (64), Expect = 1.4
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 17/136 (12%)
Frame = +2
Query: 257 GTSRPGSRAGSRAGSKPPSRHGS--------NLSLDSTDDA--TTPSRIPM--RKVTNTK 400
G+ RPGS +A +PP + N L+S D+ + P+++P+ RK ++
Sbjct: 325 GSQRPGSSTNRQAPMRPPGSGSTMNGQSANRNGQLNSRSDSRRSAPAKVPVDHRKQMSSS 384
Query: 401 TSI--ARAAANASKLGVSTPNGSRPRTPTG---YLTPASGRQRTPSGSTTPVRSGQQTAV 565
+ R+A NA L + +P G +P P S R +Q V
Sbjct: 385 NGVGPGRSATNARPLPSKSSLERKPSISAGKSSLQSPQRPSSSRPMSSDPRQRVVEQRKV 444
Query: 566 SRLLRKPSDASESGTP 613
SR + P + P
Sbjct: 445 SRDMATPRMIPKQSAP 460
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 29.9 bits (64), Expect = 1.4
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 17/136 (12%)
Frame = +2
Query: 257 GTSRPGSRAGSRAGSKPPSRHGS--------NLSLDSTDDA--TTPSRIPM--RKVTNTK 400
G+ RPGS +A +PP + N L+S D+ + P+++P+ RK ++
Sbjct: 428 GSQRPGSSTNRQAPMRPPGSGSTMNGQSANRNGQLNSRSDSRRSAPAKVPVDHRKQMSSS 487
Query: 401 TSI--ARAAANASKLGVSTPNGSRPRTPTG---YLTPASGRQRTPSGSTTPVRSGQQTAV 565
+ R+A NA L + +P G +P P S R +Q V
Sbjct: 488 NGVGPGRSATNARPLPSKSSLERKPSISAGKSSLQSPQRPSSSRPMSSDPRQRVVEQRKV 547
Query: 566 SRLLRKPSDASESGTP 613
SR + P + P
Sbjct: 548 SRDMATPRMIPKQSAP 563
>At2g22720.1 68415.m02693 expressed protein
Length = 340
Score = 29.9 bits (64), Expect = 1.4
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 17/136 (12%)
Frame = +2
Query: 257 GTSRPGSRAGSRAGSKPPSRHGS--------NLSLDSTDDA--TTPSRIPM--RKVTNTK 400
G+ RPGS +A +PP + N L+S D+ + P+++P+ RK ++
Sbjct: 96 GSQRPGSSTNRQAPMRPPGSGSTMNGQSANRNGQLNSRSDSRRSAPAKVPVDHRKQMSSS 155
Query: 401 TSI--ARAAANASKLGVSTPNGSRPRTPTG---YLTPASGRQRTPSGSTTPVRSGQQTAV 565
+ R+A NA L + +P G +P P S R +Q V
Sbjct: 156 NGVGPGRSATNARPLPSKSSLERKPSISAGKSSLQSPQRPSSSRPMSSDPRQRVVEQRKV 215
Query: 566 SRLLRKPSDASESGTP 613
SR + P + P
Sbjct: 216 SRDMATPRMIPKQSAP 231
>At3g17970.1 68416.m02286 chloroplast outer membrane translocon
subunit, putative similar to Toc64 [Pisum sativum]
GI:7453538; contains Pfam profile PF00515 TPR Domain
Length = 589
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 320 GSNLSLDSTDDATTPSRIPMRKVTNTKTSIARAAANASKLGVSTPNGSRPRTPTGY 487
G N DS + P+RIP + ++A A + + LG+ T G R P GY
Sbjct: 122 GENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFA-LGIDTVGG--VRVPAGY 174
>At2g44790.1 68415.m05574 uclacyanin II strong similarity to
uclacyanin II GI:3399769 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin II GI:3399768
Length = 202
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 398 KTSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQTA 562
K ++ A +A TP S P TPT +P SG TP TTP T+
Sbjct: 119 KLAVNVVAGSAGPPATPTPPSSTPGTPTTPESPPSGGSPTP---TTPTPGAGSTS 170
>At5g52300.1 68418.m06491 low-temperature-responsive 65 kD protein
(LTI65) / desiccation-responsive protein 29B (RD29B)
nearly identical to SP|Q04980 Low-temperature-induced 65
kDa protein (Desiccation-responsive protein 29B)
{Arabidopsis thaliana}
Length = 619
Score = 29.1 bits (62), Expect = 2.4
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +2
Query: 299 SKPPSRHGSNLSLDSTDDATTPSRIP--MRKVTNTKTSIARAAAN--ASKLGVSTPN-GS 463
S+P R S + D + T PS + T+ T+ A AA N ASKLG + N G
Sbjct: 358 SRPKERDDSEETKDESTHETKPSTYTEQLASATSAITNKAIAAKNVVASKLGYTGENGGG 417
Query: 464 RPRTPTGYLTPAS 502
+ +P TP S
Sbjct: 418 QSESPVKDETPRS 430
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 344 TDDATTPSRIPMRKVTNTKTSIARAAANAS-KLGVSTPNGSR 466
T+ + SR+P+ K N K++I+R+ + +S +L +TP G R
Sbjct: 860 TEASNKKSRVPLPKA-NEKSTISRSVSTSSPELSSNTPGGGR 900
>At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18
protein, Homo sapiens, PIR:JN0717
Length = 405
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 296 GSKPPSRHGSNLSLDSTDDATTPSRIP 376
GSK NL+ DSTD AT P++ P
Sbjct: 67 GSKGCPEQEGNLNKDSTDSATVPAKCP 93
>At2g48130.1 68415.m06025 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 183
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 179 LSDNEAASGLGTRYRKPS----VPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDST 346
L+ AA+G + PS P TLTP TS PG+R+G GSK G+ S +
Sbjct: 104 LTQCNAATGPTAQPPAPSPTEKTPDVTLTP-TSLPGARSGVGGGSKTVPSVGTGSSSRNV 162
Query: 347 D 349
D
Sbjct: 163 D 163
>At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product
[Arabidopsis thaliana] GI:871782
Length = 748
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = +2
Query: 359 TPSRIPMRKVTNTKTSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTP 538
TP R T +T I +AA + TP +RPRTP R RTP +
Sbjct: 190 TPERRSNTSDTRPRTPIHESAATGRR--PQTPE-TRPRTPDHRYATYDNRPRTPIHESAA 246
Query: 539 VRSGQQTAVSR 571
QT +R
Sbjct: 247 TERRPQTPETR 257
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 449 TPNGSRPRTPTGY--LTPASGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASES 604
+P + R+P+ L+P+ R R+ S S +P+ +G+ +VSR K S+S
Sbjct: 765 SPPYRKRRSPSASHSLSPSRSRSRSKSYSKSPIGTGKARSVSRSPSKARSPSKS 818
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +2
Query: 353 ATTPSRIPMRKVTNTKTSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGST 532
A TPS P T T ++ AA + G P+ + P P LTP P+GST
Sbjct: 44 APTPSITPTP--TPTPSATPTAAPVSPPAGSPLPSSASPPAPPTSLTPDGAPVAGPTGST 101
>At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative strong
similarity to SP|O22315 Pre-mRNA splicing factor SF2
(SR1 protein) {Arabidopsis thaliana}
Length = 300
Score = 28.7 bits (61), Expect = 3.2
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +2
Query: 263 SRPGSRAGSRAGSKPPSRHGSNLSLDSTDDATTPSRIPMRKVTNTKTSIARAAANASKLG 442
SR SR+ SR+ S+ SR G S S + + S+ P + ++ + + + S+
Sbjct: 205 SRSPSRSRSRSRSRSRSR-GRGRS-HSRSRSLSRSKSPRKDLSKSPRRSLSRSISKSRSP 262
Query: 443 VSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSG 550
S PR + + + R R+PS S VR G
Sbjct: 263 SPDKKKSPPRAMSRSKSRSRSRSRSPSKSPPKVREG 298
>At1g43970.1 68414.m05072 hypothetical protein
Length = 239
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 185 DNEAASGLGTRYRKPSVPRSTLTPGTSRPGSRAGSRAGSKP 307
+++++S + R R+ SVP ST PG S SR R P
Sbjct: 57 EDDSSSIVPVRNRQNSVPMSTEVPGVSSVTSRLAKRKRDTP 97
>At5g65530.1 68418.m08245 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 456
Score = 28.3 bits (60), Expect = 4.3
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -1
Query: 338 PRINLIHVS-KGVLILPSIQLENRVEMFPVSKWTSERWASCILFQVRSPLRYH*ASLVFL 162
PR +IH K IL S E ++ F ++KW E W I+F + Y A F+
Sbjct: 262 PR-RIIHRDIKASNILLSQDYEAQISDFGLAKWLPEHWPHHIVFPIEGTFGYL-APEYFM 319
Query: 161 HSTKIWKRD 135
H K D
Sbjct: 320 HGIVDEKTD 328
>At1g32810.1 68414.m04044 expressed protein
Length = 654
Score = 28.3 bits (60), Expect = 4.3
Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 5/138 (3%)
Frame = +2
Query: 215 RYRKP-SVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDSTDDATTPSRIPMRKVT 391
R R+P S+P S P R S +GS+ + R + S + + R R
Sbjct: 325 RMRQPGSLPLSPTAPSFKRTSS-SGSKDHTTFSRRKNKDTSKEGYCNLRDDDRCSTRSAK 383
Query: 392 NTKTSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQ-QTAVS 568
N ++ R ++ G S + T + +S + P STT SG ++
Sbjct: 384 NRRSPDRRTQQDSGSRGGSLCSKGEENETTKTSSYSSRKVLLPPNSTTSTSSGPCSSSEL 443
Query: 569 RLLRKPSDAS---ESGTP 613
KPS S +GTP
Sbjct: 444 NEHNKPSPHSSPRNNGTP 461
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 266 RPGSRAGSRAGSKPPSRHGSNLSLDSTDDATTPSRI-PMRKVTNTKTSIARAA 421
R GSR GSR G K + ++ + D+ +ATT P ++ T+ + A
Sbjct: 8 RGGSRGGSRGGRKTGASSSASKNDDAVVEATTTQETQPTQETEETEDKVESPA 60
>At3g53320.1 68416.m05883 expressed protein
Length = 553
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 233 VPRSTLTPGTSR-PGSRAGSRAGSKPPSRHGSNLSLDSTDDATT-PSRIPMRKVTNTKTS 406
VP ++ P R P + G G+ RHGS+ S T P+R P+++ TN+K+
Sbjct: 469 VPSASAKPSGLRVPSPKIGFFDGA----RHGSSSSASKKSGGKTQPARSPIQESTNSKSK 524
Query: 407 IARAAANAS 433
+ + S
Sbjct: 525 ASSKVVSVS 533
>At3g22520.1 68416.m02846 expressed protein
Length = 600
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 446 STPNGSRPRTPTGYLTPASGRQRTPSGSTTPV---RSGQQTAVSR 571
STP GS + G TPA+G P ST P +SG++T++ +
Sbjct: 258 STPRGSSNKKKKGATTPATG----PQSSTKPKPSRQSGRRTSIQQ 298
>At2g47350.2 68415.m05910 PAPA-1-like family protein / zinc finger
(HIT type) family protein contains Pfam domains,
PF04795: PAPA-1-like conserved region and PF04438: HIT
zinc finger
Length = 374
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 491 TPASGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASE 601
T + +Q TPSG T SG++ AVS + D +E
Sbjct: 252 TESGRKQLTPSGITNGENSGKKKAVSEQASEDMDCAE 288
>At2g47350.1 68415.m05911 PAPA-1-like family protein / zinc finger
(HIT type) family protein contains Pfam domains,
PF04795: PAPA-1-like conserved region and PF04438: HIT
zinc finger
Length = 486
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 491 TPASGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASE 601
T + +Q TPSG T SG++ AVS + D +E
Sbjct: 252 TESGRKQLTPSGITNGENSGKKKAVSEQASEDMDCAE 288
>At2g37070.1 68415.m04549 expressed protein
Length = 420
Score = 27.9 bits (59), Expect = 5.7
Identities = 25/97 (25%), Positives = 39/97 (40%)
Frame = +2
Query: 269 PGSRAGSRAGSKPPSRHGSNLSLDSTDDATTPSRIPMRKVTNTKTSIARAAANASKLGVS 448
P R + PS S L S+++ P+ P+RK ++ A A +
Sbjct: 44 PDKRKDLGSTEAVPSPTTSTLDDPSSEEKMKPN--PIRKRPGIRSQ-GLAKATKHPVASE 100
Query: 449 TPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQT 559
N S R TG P+SG +T S ++ Q+T
Sbjct: 101 EHNTSISRPSTGLNRPSSGLSKTKRASVDTNKAKQET 137
>At1g72230.1 68414.m08351 plastocyanin-like domain-containing
protein similar to blue copper protein SP:Q41001 from
[Pisum sativum]
Length = 181
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 407 IARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPV 541
I AA++ G T + + P G TP+ G++ +PS S T V
Sbjct: 116 IVPAASSGGSTGDGTTDKNTP-VQDGKTTPSEGKKASPSASATAV 159
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 168 VPALNEDLEARPAAPAPADIGTDR 97
+PA N+D++ + P PAD G+ R
Sbjct: 169 IPAGNDDVQGKTDCPPPADAGSKR 192
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 168 VPALNEDLEARPAAPAPADIGTDR 97
+PA N+D++ + P PAD G+ R
Sbjct: 169 IPAGNDDVQGKTDCPPPADAGSKR 192
>At3g46920.1 68416.m05092 protein kinase family protein similar to
MAP3K delta-1 protein kinase [Arabidopsis thaliana]
GI:2253010; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 1171
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 227 PSVPRSTLTPGTSRPGSRAGSRAGSK-PPSRH 319
P+ PR+T GT PG GS+ PPS H
Sbjct: 412 PTEPRNTAYQGTISPGIPFDGYGGSQVPPSNH 443
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 341 STDDATTPSRIPMRKVTNTKTSIARAAANASKL-GVSTPNGSRPRTPTGYLTPASGRQRT 517
S A PS P +++ + + ++S +TP+ P++P+ +P+ +
Sbjct: 254 SHSPAHAPSHSPAHSPSHSPATPKSPSPSSSPAQSPATPSPMTPQSPSPVSSPSPDQSAA 313
Query: 518 PSGSTTPV 541
PS +TP+
Sbjct: 314 PSDQSTPL 321
>At5g21160.1 68418.m02528 La domain-containing protein /
proline-rich family protein contains proline-rich
extensin domains, INTERPRO:IPR002965, PF05383: La domain
Length = 826
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 263 SRPGSRAGSRAGSKPPSRHGSNLS-LDSTDDATTPSRIP 376
S P S G GS PP HG LS L S+ T P
Sbjct: 607 SPPSSSIGFFFGSTPPDSHGPRLSKLSSSPQCTLSGSSP 645
>At4g30710.2 68417.m04353 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 27.1 bits (57), Expect = 9.9
Identities = 37/150 (24%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Frame = +2
Query: 203 GLGTRYRKPSVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSN-----------LSLDSTD 349
G+G R+ S+P S+ + + S S G P++ N LS S D
Sbjct: 242 GMGPSLRRMSLPLSSSSRPLHKTSSNTSSYGGLVSPTKSEDNNIARTSGAQRLLSAGSLD 301
Query: 350 DATTPSRI----PMRKVTNTKTSIARA---AANASKLGVSTPNG---SRPRTPTGYLTPA 499
AT + + P+ + S +R ++++ G+ST G SR +P+ L+P
Sbjct: 302 RATLATAVARLHPLPAPGSRPASPSRTSFLSSSSISRGMSTSRGVSPSRGLSPSRGLSPT 361
Query: 500 SGRQRTPSGSTTPVRSGQQTAVSRLLRKPS 589
G +PS +P R + +R PS
Sbjct: 362 RG--LSPSRGLSPSRGTNTSCFARPSTPPS 389
>At4g30710.1 68417.m04352 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 27.1 bits (57), Expect = 9.9
Identities = 37/150 (24%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Frame = +2
Query: 203 GLGTRYRKPSVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSN-----------LSLDSTD 349
G+G R+ S+P S+ + + S S G P++ N LS S D
Sbjct: 242 GMGPSLRRMSLPLSSSSRPLHKTSSNTSSYGGLVSPTKSEDNNIARTSGAQRLLSAGSLD 301
Query: 350 DATTPSRI----PMRKVTNTKTSIARA---AANASKLGVSTPNG---SRPRTPTGYLTPA 499
AT + + P+ + S +R ++++ G+ST G SR +P+ L+P
Sbjct: 302 RATLATAVARLHPLPAPGSRPASPSRTSFLSSSSISRGMSTSRGVSPSRGLSPSRGLSPT 361
Query: 500 SGRQRTPSGSTTPVRSGQQTAVSRLLRKPS 589
G +PS +P R + +R PS
Sbjct: 362 RG--LSPSRGLSPSRGTNTSCFARPSTPPS 389
>At4g27910.1 68417.m04006 PHD finger protein-related / SET
domain-containing protein (TX4) nearly identical over
285 amino acids to trithorax 4 [Arabidopsis thaliana]
GI:16118405; contains Pfam profiles PF00856: SET domain,
PF00855: PWWP domain; identical to cDNA trithorax 4
(TX4) partial cds GI:16118404
Length = 1027
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 523 RWGPLSSTSRRQVTGRRPRTGAVRRANPKLACIGGST 413
RW ++ S +++ PR G +++ LAC G T
Sbjct: 331 RWIQETAVSNQELNNNAPRQGLLKKHRNPLACAGCET 367
>At3g28830.1 68416.m03597 expressed protein
Length = 539
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/128 (17%), Positives = 48/128 (37%)
Frame = +2
Query: 179 LSDNEAASGLGTRYRKPSVPRSTLTPGTSRPGSRAGSRAGSKPPSRHGSNLSLDSTDDAT 358
++D+ G + + S + G+ S+ S +GS + S A
Sbjct: 190 VNDSSIVGGAASSESSSTKSGSVSSSGSVSTKSKESSSSGSSASGSVATKSKESSGGSAA 249
Query: 359 TPSRIPMRKVTNTKTSIARAAANASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTP 538
T S+ TK+ + + + +P+GS +P+G ++ S + + S +
Sbjct: 250 TKSKESSGGSAATKSKESSGGSATTGKTSGSPSGSPKASPSGSVSGKSSSKGSASAQGSA 309
Query: 539 VRSGQQTA 562
G +A
Sbjct: 310 SAQGSASA 317
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 431 SKLGVSTPNGSRPRTPTGYLTPA--SGRQRTPSGSTTP 538
S+ G STP GS P +G+L P PS S TP
Sbjct: 225 SEPGPSTPTGSIPSPSSGFLPPIVYPPPMAPPSPSVTP 262
>At1g77390.1 68414.m09012 cyclin, putative similar to mitotic cyclin
a2-type [Glycine max] GI:857397; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 442
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +2
Query: 425 NASKLGVSTPNGSRPRTPTGYLTPASGRQRTPSGSTTPVRSGQQTAVSRLLRKPS 589
N +K S + R P G +T R PS S+T V + S+ KP+
Sbjct: 18 NLAKTRTSLRDVGNRRAPLGDITNQKNGSRNPSPSSTLVNCSNKIGQSKKAPKPA 72
>At1g52500.2 68414.m05927 formamidopyrimidine-DNA glycolase family
protein / mutM, putative (MMH-1) identical to mutM
homologue-2 [Arabidopsis thaliana] GP:3550983
PMID:9819050; contains Pfam profile PF01149:
Formamidopyrimidine-DNA glycosylase
Length = 390
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +2
Query: 263 SRPGSRAGSRAGSKPPSRHGSNLSLDSTDDATTPSRIPMRKVTNTKTSIAR-AAANASKL 439
S+ G + G KP S+ + S D DD+ + K TK +I R + A+
Sbjct: 321 SKKGQKPRGGRGKKPASKTKTEESDDDGDDSEAEEEVVKPKGRGTKPAIKRKSEEKATSQ 380
Query: 440 GVSTPNGSR 466
P G +
Sbjct: 381 AGKKPKGRK 389
>At1g22880.1 68414.m02856 glycosyl hydrolase family 9 protein
similar to GB:AAB65156 and GB:AAA96135
Length = 484
Score = 27.1 bits (57), Expect = 9.9
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = +2
Query: 365 SRIPMRKVTNTKTSIARAAANASKLGVSTPNGSRP--RTPTGYLTPASGRQRTPS--GST 532
SR+ +R T+ ARA +GV PNG P TP + +PS GS
Sbjct: 110 SRVAIRWATDYLLKCARATPGKLYVGVGDPNGDHKCWERPEDMDTPRTVYSVSPSNPGSD 169
Query: 533 TPVRSGQQTAVSRLLRKPSDASES 604
+ A S ++ + D S
Sbjct: 170 VAAETAAALAASSMVFRKVDPKYS 193
>At1g13250.1 68414.m01538 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 Glycosyl transferase
family 8
Length = 345
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 232 RSEVHFDTGNISTRFSSWIEGRIKTPFETWIK 327
R +F+TG + W E R+ ETW++
Sbjct: 219 RKPCYFNTGVMVIDLGKWRERRVTVKLETWMR 250
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,762,542
Number of Sequences: 28952
Number of extensions: 302148
Number of successful extensions: 1102
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -