Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0304
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       30   0.018
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    28   0.095
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    28   0.095
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   4.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   6.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   6.3  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   6.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   6.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.3  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 30.3 bits (65), Expect = 0.018
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 295 YKIEDPHTGDLKSQHETRDGDVVKGYYSLHEADGSIRVVEYSAD 426
           Y +E  +    + +  T DG +V  Y  +   DGS+R V Y+AD
Sbjct: 195 YVVEGRNYRKYRVEERTSDGFIVGEYGVVSHDDGSLRGVRYTAD 238


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 0.095
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 625 VNLCFKPQQILRAFIAFTTLMVKVRVVAILDYS*DKKVFNDGSTVE 488
           +N  F  QQ+LR  +AF +++  + +VAI +++      N+G T +
Sbjct: 278 INYAFCVQQLLRITVAFISIVTALFLVAI-NFNKSSSEENEGKTTQ 322


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 27.9 bits (59), Expect = 0.095
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 625 VNLCFKPQQILRAFIAFTTLMVKVRVVAILDYS*DKKVFNDGSTVE 488
           +N  F  QQ+LR  +AF +++  + +VAI +++      N+G T +
Sbjct: 278 INYAFCVQQLLRITVAFISIVTALFLVAI-NFNKSSSEENEGKTTQ 322


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 295 IQMHIWDEHHN 263
           + +HI+D HHN
Sbjct: 86  VHLHIYDMHHN 96


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 630 VLLIFVLSHNRYYGPSSPLR 571
           VL I  +S  RYY    PL+
Sbjct: 158 VLTILAISFERYYAICKPLK 177


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 630 VLLIFVLSHNRYYGPSSPLR 571
           VL I  +S  RYY    PL+
Sbjct: 158 VLTILAISFERYYAICKPLK 177


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 295 IQMHIWDEHHN 263
           + +HI+D HHN
Sbjct: 403 VNLHIYDLHHN 413


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +1

Query: 244 DQPHHEDYDAHPKYAFEYKIEDPHTGDLKSQHETRDGDVVKGYYSLH 384
           + P+ E+Y  H  Y   Y+ E P+       H + DG  V    + H
Sbjct: 364 NHPNSENYINHQNYVQGYQGEHPNYNHY-GYHYSGDGGEVAHLPNTH 409


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
 Frame = -3

Query: 337 VGSSGPQCEGLRF----CIQMHIWDEHHN 263
           +G     C GL+        +HI+D HHN
Sbjct: 86  LGEDFVTCNGLKLPKSTITHLHIYDLHHN 114


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 295 IQMHIWDEHHN 263
           + +HI+D HHN
Sbjct: 403 VNLHIYDLHHN 413


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +1

Query: 244 DQPHHEDYDAHPKYAFEYKIEDPHTGDLKSQHETRDGDVVKGYYSLH 384
           + P+ E+Y  H  Y   Y+ E P+       H + DG  V    + H
Sbjct: 312 NHPNSENYINHQNYVQGYQGEHPNYNHY-GYHYSGDGGEVAHLPNTH 357


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
 Frame = -3

Query: 769 PPVKYQN-----GWSEKMFPKRQKY*S*LVNCFVFILIL 668
           P VKY N      W +  FP  QKY   L  C+  +L++
Sbjct: 17  PLVKYLNIFFITPWYD--FPTNQKYYPSLAKCYACLLMV 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,986
Number of Sequences: 336
Number of extensions: 3491
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)