Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0300
         (715 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009974-1|AAQ22443.1|  602|Drosophila melanogaster RE58428p pro...    29   6.3  
AE014134-1954|AAF53012.2|  777|Drosophila melanogaster CG31869-P...    29   6.3  
AE014134-1915|AAF52973.1|  406|Drosophila melanogaster CG18302-P...    29   6.3  
M32311-1|AAA28529.1|  652|Drosophila melanogaster fasciclin I pr...    29   8.3  
M20545-1|AAA28531.1|  652|Drosophila melanogaster protein ( D.me...    29   8.3  
AE014297-2247|AAF55346.2|  649|Drosophila melanogaster CG6588-PA...    29   8.3  
AE014297-2246|AAN13715.1|  652|Drosophila melanogaster CG6588-PB...    29   8.3  
AE014297-2245|AAN13714.1|  655|Drosophila melanogaster CG6588-PC...    29   8.3  

>BT009974-1|AAQ22443.1|  602|Drosophila melanogaster RE58428p
           protein.
          Length = 602

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 611 VDMNGYSPSLREDNKSVNVIEFPTLSFSDIAISSR 507
           V+ N   PSL ED+ S+  + FP +   DIA S +
Sbjct: 382 VESNPAYPSLPEDDFSLRDVNFPLVELEDIAESEK 416


>AE014134-1954|AAF53012.2|  777|Drosophila melanogaster CG31869-PA
           protein.
          Length = 777

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 611 VDMNGYSPSLREDNKSVNVIEFPTLSFSDIAISSR 507
           V+ N   PSL ED+ S+  + FP +   DIA S +
Sbjct: 557 VESNPAYPSLPEDDFSLRDVNFPLVELEDIAESEK 591


>AE014134-1915|AAF52973.1|  406|Drosophila melanogaster CG18302-PA
           protein.
          Length = 406

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 151 RDSFKINKIHSYLPENYNYSYHEVAMYIF--YIKYIIERREE 270
           R S K  + H Y P+ +++S+HE+ +Y     I Y++ R ++
Sbjct: 122 RYSRKHKRYHRYQPQFWDFSFHELGVYDLPAAIDYVLARSKD 163


>M32311-1|AAA28529.1|  652|Drosophila melanogaster fasciclin I
           protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -3

Query: 635 VNVWSLKNVDMNGYSPSLREDNKSVNVIEFPTLSFSDIAIS 513
           V +W+ K +  N Y P +   N  ++VI++P L   D+ ++
Sbjct: 587 VIIWNYKKI--NVYRPDVECTNGIIHVIDYPLLEEKDVVVA 625


>M20545-1|AAA28531.1|  652|Drosophila melanogaster protein (
           D.melanogaster fasciclinI mRNA, complete cds. ).
          Length = 652

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -3

Query: 635 VNVWSLKNVDMNGYSPSLREDNKSVNVIEFPTLSFSDIAIS 513
           V +W+ K +  N Y P +   N  ++VI++P L   D+ ++
Sbjct: 587 VIIWNYKKI--NVYRPDVECTNGIIHVIDYPLLEEKDVVVA 625


>AE014297-2247|AAF55346.2|  649|Drosophila melanogaster CG6588-PA,
           isoform A protein.
          Length = 649

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -3

Query: 635 VNVWSLKNVDMNGYSPSLREDNKSVNVIEFPTLSFSDIAIS 513
           V +W+ K +  N Y P +   N  ++VI++P L   D+ ++
Sbjct: 584 VIIWNYKKI--NVYRPDVECTNGIIHVIDYPLLEEKDVVVA 622


>AE014297-2246|AAN13715.1|  652|Drosophila melanogaster CG6588-PB,
           isoform B protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -3

Query: 635 VNVWSLKNVDMNGYSPSLREDNKSVNVIEFPTLSFSDIAIS 513
           V +W+ K +  N Y P +   N  ++VI++P L   D+ ++
Sbjct: 587 VIIWNYKKI--NVYRPDVECTNGIIHVIDYPLLEEKDVVVA 625


>AE014297-2245|AAN13714.1|  655|Drosophila melanogaster CG6588-PC,
           isoform C protein.
          Length = 655

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -3

Query: 635 VNVWSLKNVDMNGYSPSLREDNKSVNVIEFPTLSFSDIAIS 513
           V +W+ K +  N Y P +   N  ++VI++P L   D+ ++
Sbjct: 590 VIIWNYKKI--NVYRPDVECTNGIIHVIDYPLLEEKDVVVA 628


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,379,679
Number of Sequences: 53049
Number of extensions: 481596
Number of successful extensions: 1119
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)