Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0299
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81117-8|CAB03316.2|  334|Caenorhabditis elegans Hypothetical pr...    31   0.65 
Z81117-7|CAB03315.2|  329|Caenorhabditis elegans Hypothetical pr...    31   0.86 
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.     28   6.0  

>Z81117-8|CAB03316.2|  334|Caenorhabditis elegans Hypothetical
           protein T06E6.7 protein.
          Length = 334

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 740 ILISFFFLNVNCFVPIIY*LVRSFLNYH 657
           I   F   ++ CFVP +Y ++  +LNYH
Sbjct: 235 IYTQFGVFSITCFVPYLYIVISCYLNYH 262


>Z81117-7|CAB03315.2|  329|Caenorhabditis elegans Hypothetical
           protein T06E6.6 protein.
          Length = 329

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -1

Query: 737 LISFFFLNVNCFVPIIY*LVRSFLNYH 657
           ++SFF   + CF+P +Y ++  +LNYH
Sbjct: 239 IVSFF---ITCFIPYLYIMICCYLNYH 262


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
 Frame = +2

Query: 173 HILTS*HIPEQSYTTNNFIYKQM---KLNCGVKL 265
           H+L S H+    Y T++FI +++   KL+CG+ +
Sbjct: 40  HVLASNHVGYSDYNTSSFISEELARQKLSCGLNI 73


>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
            C10C5.6b protein.
          Length = 1782

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 199  WNMLRG*YM*VCLTISSYRYYDSFCKHIMNFSTYIPGSKTYLG 71
            WN   G  +  C    S R +D+ C+ + +   Y PGSK   G
Sbjct: 1493 WNQQNGKLL--CTGTRSVRIWDAHCEKVCHDVMYSPGSKQQTG 1533


>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
            C10C5.6a protein.
          Length = 1776

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 199  WNMLRG*YM*VCLTISSYRYYDSFCKHIMNFSTYIPGSKTYLG 71
            WN   G  +  C    S R +D+ C+ + +   Y PGSK   G
Sbjct: 1487 WNQQNGKLL--CTGTRSVRIWDAHCEKVCHDVMYSPGSKQQTG 1527


>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
            C10C5.6b protein.
          Length = 1782

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 199  WNMLRG*YM*VCLTISSYRYYDSFCKHIMNFSTYIPGSKTYLG 71
            WN   G  +  C    S R +D+ C+ + +   Y PGSK   G
Sbjct: 1493 WNQQNGKLL--CTGTRSVRIWDAHCEKVCHDVMYSPGSKQQTG 1533


>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
            C10C5.6a protein.
          Length = 1776

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 199  WNMLRG*YM*VCLTISSYRYYDSFCKHIMNFSTYIPGSKTYLG 71
            WN   G  +  C    S R +D+ C+ + +   Y PGSK   G
Sbjct: 1487 WNQQNGKLL--CTGTRSVRIWDAHCEKVCHDVMYSPGSKQQTG 1527


>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
          Length = 1800

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 199  WNMLRG*YM*VCLTISSYRYYDSFCKHIMNFSTYIPGSKTYLG 71
            WN   G  +  C    S R +D+ C+ + +   Y PGSK   G
Sbjct: 1511 WNQQNGKLL--CTGTRSVRIWDAHCEKVCHDVMYSPGSKQQTG 1551


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,308,263
Number of Sequences: 27780
Number of extensions: 316197
Number of successful extensions: 565
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)