Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0296
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   2.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    20   6.3  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    20   6.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    20   6.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    20   6.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   6.3  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 146 GEAVVVTIIETLERISQGGWRI 211
           GEA ++   E +E   +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 55  LVVGPLVSPRE*VPSPYLFLP*SSNTL 135
           + +G    P +  P PY F P +S  L
Sbjct: 194 IALGAFYQPLQPFPPPYPFYPGTSAML 220


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 178 GLNYSYNDCFTLQTV 134
           G+N  + DCF L  +
Sbjct: 82  GMNAGFEDCFLLDGI 96


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 178 GLNYSYNDCFTLQTV 134
           G+N  + DCF L  +
Sbjct: 315 GMNAGFEDCFLLDGI 329


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 178 GLNYSYNDCFTLQTV 134
           G+N  + DCF L  +
Sbjct: 315 GMNAGFEDCFLLDGI 329


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 64  GPLVSPRE*VPSPY 105
           G  V PR+  PSPY
Sbjct: 388 GIKVEPRDKAPSPY 401


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,426
Number of Sequences: 336
Number of extensions: 2144
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)