Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0295
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000299-9|AAC47984.1|  221|Caenorhabditis elegans Hypothetical ...    31   0.79 
U23179-6|AAK68205.1|  341|Caenorhabditis elegans Serpentine rece...    29   4.2  
AF067936-7|AAC19215.1|  316|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z92829-15|CAB07343.2|  359|Caenorhabditis elegans Hypothetical p...    28   7.3  
Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical p...    28   7.3  
Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z81117-5|CAB03321.1|  279|Caenorhabditis elegans Hypothetical pr...    28   7.3  
U23179-5|AAK68210.2|  347|Caenorhabditis elegans Serpentine rece...    28   7.3  
Z66562-4|CAA91465.1|  258|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z37092-9|CAA85458.1|  126|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>AF000299-9|AAC47984.1|  221|Caenorhabditis elegans Hypothetical
           protein E03H12.9 protein.
          Length = 221

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 18/66 (27%), Positives = 31/66 (46%)
 Frame = +1

Query: 268 NYPDTEYYGNNNPNCQSAEQMAVSTIVQSEASRANSILFSCINNDSSQYDIQYTRLVNFI 447
           +YP    YGN N +C       +++I QS++S  + I       ++   D+Q T  V  +
Sbjct: 54  SYPCMIAYGNEN-SCTFCNAHVINSITQSDSSSGSKIGIKVDPQNACPKDVQTTEYVKTV 112

Query: 448 KEIRIE 465
              R+E
Sbjct: 113 GISRLE 118


>U23179-6|AAK68205.1|  341|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 1 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 345 CTV*SKSCKFYLVFMYQQ*FLSIRYTIHQVSQLYK 449
           C +     KF   F++QQ  LS+RY + ++SQ  K
Sbjct: 203 CIILLVHSKFKTKFLHQQRSLSVRYELEEISQTSK 237


>AF067936-7|AAC19215.1|  316|Caenorhabditis elegans Hypothetical
           protein C24G6.8 protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 19/66 (28%), Positives = 39/66 (59%)
 Frame = +1

Query: 184 KYSMIMSLIKKTRNDAIKAAVASYLERRNYPDTEYYGNNNPNCQSAEQMAVSTIVQSEAS 363
           +Y+ +++L K+T +  ++ AVA  +ER N  D +   +++ N ++ E+M     VQS A 
Sbjct: 144 EYTAVLAL-KRTNSAGVEQAVAWIVERSNESDFDEDSSSSEN-EADEEMGA---VQSVAG 198

Query: 364 RANSIL 381
           R + ++
Sbjct: 199 RTHKMV 204


>Z92829-15|CAB07343.2|  359|Caenorhabditis elegans Hypothetical
           protein F10A3.9 protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
 Frame = -3

Query: 166 CFAMSHLF------DFITYSFYLSTELNLYSLVDIIYYNLPFYTANTYNLNSWI 23
           CFA + +F      D     FYL    N  S  D+ YY  PFY  N  + NS+I
Sbjct: 153 CFAAAVIFAGKEDSDRFLREFYLPLVQNKTSFEDV-YYGGPFYYLNDAHGNSYI 205


>Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical
           protein F14F8.13 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 145 FDFITYSFYLSTELNLYSLVDIIYYNLPFYTANTYNLN 32
           F +I    Y+S+EL L  +  + Y  LPFY    +NLN
Sbjct: 7   FTYIPDLMYISSELILIFICIVSYSTLPFY-IYVHNLN 43


>Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical
           protein F14F8.12 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 145 FDFITYSFYLSTELNLYSLVDIIYYNLPFYTANTYNLN 32
           F +I    Y+S+EL L  +  + Y  LPFY    +NLN
Sbjct: 7   FTYIPDLMYISSELILIFICIVSYSTLPFY-IYVHNLN 43


>Z81117-5|CAB03321.1|  279|Caenorhabditis elegans Hypothetical
           protein T06E6.11 protein.
          Length = 279

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = -1

Query: 432 PGVLYIVLRGIIVDT*KQDRICTTCFRLYNSGNCHLLST--LAIWVIVTVIFS 280
           P  + I +R I+V    QDRI  TCF +    + H +ST  ++++++   +F+
Sbjct: 87  PTNVCITIRPILVILINQDRIFATCFPISYHIHRHKISTSDVSLFLLACALFN 139


>U23179-5|AAK68210.2|  347|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 2 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 369 KFYLVFMYQQ*FLSIRYTIHQVSQLYK 449
           KF   F++QQ  LS+RY + ++SQ  K
Sbjct: 217 KFKARFLHQQRSLSVRYLLEEISQTSK 243


>Z66562-4|CAA91465.1|  258|Caenorhabditis elegans Hypothetical
           protein F42E11.3 protein.
          Length = 258

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 190 NTFNKIKQCFAMSHLFDFITYSFYL 116
           N F KI     +S +F F+ Y+FYL
Sbjct: 18  NVFRKIHYLELLSQMFGFLFYTFYL 42


>Z37092-9|CAA85458.1|  126|Caenorhabditis elegans Hypothetical
           protein F44F4.9 protein.
          Length = 126

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = -1

Query: 327 LLSTLAIWVIVTVIFSIGIVSPF*IRSHRSF 235
           L STLAI+VI TVIF + + S    R  R F
Sbjct: 35  LYSTLAIFVISTVIFGLSLYSFLKNRRLRQF 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,702,228
Number of Sequences: 27780
Number of extensions: 314187
Number of successful extensions: 825
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)