Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0292
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   0.96 
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   3.9  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.8 bits (49), Expect = 0.96
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 147 CKGYWI*WIRKDVSRASTVTGSCMI 73
           CKG++   +RKD+S A     +C+I
Sbjct: 106 CKGFFKRTVRKDLSYACREEKNCII 130


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 354 GGARAVVSKSHPSWLSLCSPTCPGETGKAFGPPV 455
           GG R+  + S  + +  C    PG++G+ FGP +
Sbjct: 29  GGKRSKFAISENA-VKPCVSCGPGQSGQCFGPSI 61


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 87  QSPSTP*TRPYGSIRSNNL 143
           Q    P T+PYG+ RS  +
Sbjct: 547 QQSQNPPTKPYGTCRSEGI 565


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 84  SQSPSTP*TRPYGSIRSNNLC 146
           S   STP  R YG++  N  C
Sbjct: 414 SDQRSTPSPRVYGNVNENQDC 434


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,834
Number of Sequences: 336
Number of extensions: 2061
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)