Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0291
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.0  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.2  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   6.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.1  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   9.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.1  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 33   MAYAFTILNSLQGLVIFI 86
            M + F +LNSL  +VIF+
Sbjct: 1225 MVFTFLMLNSLYVIVIFL 1242


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 33   MAYAFTILNSLQGLVIFI 86
            M + F +LNSL  +VIF+
Sbjct: 1225 MVFTFLMLNSLYVIVIFL 1242


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 12  LNQQTVVMAYAFTILNSLQGLVIFIFHC 95
           + Q  V++ Y   + ++ QG+++  F C
Sbjct: 232 IEQYNVILRYTKIVSDTYQGILVVQFFC 259


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 303 LDPRDVTSYNIHPETRWNVRPTAPIYVPNDDAR 401
           LD  ++ +Y+ H +        AP+Y P+ D++
Sbjct: 271 LDFINLMAYDFHGKWERETGHNAPLYSPSSDSQ 303



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 559 RLARTNGRAAMPVPVYGRTLLLNTT 633
           +L     +  + +P YGRT  L+ T
Sbjct: 319 KLGTPKEKLVIGMPTYGRTFTLSNT 343


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 105 DKFRNECARLSRRHR 149
           D  +NECA+ + +H+
Sbjct: 65  DALQNECAKCNEKHK 79


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/36 (27%), Positives = 13/36 (36%)
 Frame = -2

Query: 330  CSSSHLWGPIRRQAARPGGTSCS*RSPGACRRGSSW 223
            C+    W   R+    P    C  + PG     SSW
Sbjct: 1131 CAGGLHWNKERKICDWPKSAKCEEKKPGHKPSTSSW 1166


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 558 SIGANEWAGSNAGASVWK 611
           S+G N WA   A    W+
Sbjct: 519 SLGINPWANCTASTRCWE 536


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 105 DKFRNECARLSRRHR 149
           D  +NECA+ + +H+
Sbjct: 64  DALKNECAKCNDKHK 78


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = -3

Query: 386 WHVYRRGRAYVPSRFRMYVVARHISGVQFVVRRRGLVVPPA 264
           +H+Y     + P+ +  ++VA +   V  ++     + PPA
Sbjct: 498 FHIYTPEDLFAPNTYNRHLVAPNGDHVISLIDEISYMAPPA 538



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +3

Query: 558 SIGANEWAGSNAGASVWKNTSFKH 629
           SIG      S  G   WK+  F++
Sbjct: 67  SIGGGPRFSSGVGRKAWKHLDFRN 90


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 341 RMYVVARHISGVQFVVR 291
           R Y+ A H+SG+Q VVR
Sbjct: 54  RRYMNA-HLSGIQLVVR 69


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 580 RAAMPVPVYGRTLLLNT 630
           + A+ +PVYG+T  L++
Sbjct: 255 KIALGLPVYGKTFTLSS 271


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +3

Query: 558 SIGANEWAGSNAGASVWKNTSFKH 629
           SIG      S  G   WK+  F++
Sbjct: 67  SIGGGPRFSSGVGRKAWKHLDFRN 90


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 26  SGHGLCVYHPELPPRVGHLHIPLSPE*QVPQ 118
           S HG  ++H   PP +       +P+ QVP+
Sbjct: 91  SHHGPPIHHQIRPPILHDTQPMCNPQLQVPR 121


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 543 NKMAASIGANEWAGSNAGASVWKNTSFKHHVWEHLHA 653
           NK  +   A +   +N  A+   N +  HH   H+HA
Sbjct: 298 NKKNSQRQAAQQQNNNNAAT--NNQNHHHHAGHHIHA 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,366
Number of Sequences: 336
Number of extensions: 3769
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)