Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0291
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p pro...    57   2e-08
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ...    57   2e-08
BT029077-1|ABJ17010.1|  194|Drosophila melanogaster IP09468p pro...    30   2.5  
Z11527-1|CAA77616.1|  614|Drosophila melanogaster CYS3HIS finger...    29   4.3  
BT021256-1|AAX33404.1|  608|Drosophila melanogaster RE58038p pro...    29   4.3  
AE014297-3282|AAO41594.1|  599|Drosophila melanogaster CG4620-PB...    29   4.3  
AE014297-3281|AAO41593.1|  599|Drosophila melanogaster CG4620-PA...    29   4.3  
AE014297-3267|AAF56093.1|  660|Drosophila melanogaster CG13830-P...    29   4.3  
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr...    29   7.6  
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA...    29   7.6  
AE014296-2277|AAF49818.2|  316|Drosophila melanogaster CG10154-P...    29   7.6  

>BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p protein.
          Length = 1870

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = +3

Query: 30   VMAYAFTILNSLQGLVIFIFHCLQNDKFRNECARLSRRHRWLSCCL 167
            V  Y F   N+L GL IF+FHC+QN+K R E  +  R+H WL  CL
Sbjct: 1157 VYGYCFICFNTLLGLYIFVFHCIQNEKIRREYRKYVRQHAWLPKCL 1202


>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
            protein.
          Length = 1711

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = +3

Query: 30   VMAYAFTILNSLQGLVIFIFHCLQNDKFRNECARLSRRHRWLSCCL 167
            V  Y F   N+L GL IF+FHC+QN+K R E  +  R+H WL  CL
Sbjct: 998  VYGYCFICFNTLLGLYIFVFHCIQNEKIRREYRKYVRQHAWLPKCL 1043


>BT029077-1|ABJ17010.1|  194|Drosophila melanogaster IP09468p
           protein.
          Length = 194

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -3

Query: 290 RRGLVVPPALD-GALARVDVVRAGPRGSIVVLKSLR--GLPRPVQAAREPAVATTQTS 126
           RR  VVP       LA+  ++   P   +V  K  R   +PRPV A+REPA A T+ S
Sbjct: 28  RRAAVVPANRQLELLAQHPMLELCPPPFLVDRKYTRIARIPRPVPASREPAAAATRPS 85


>Z11527-1|CAA77616.1|  614|Drosophila melanogaster CYS3HIS finger
           protein protein.
          Length = 614

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 301 NWTPEM*RATTYIRKRDGTYARPRRYTCQTTTQDRSVCPLRKTSPTVRRT 450
           NW  +  R    +RKRDGT+       C    +   +CP     P + RT
Sbjct: 65  NWHFQNQRRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRT 114


>BT021256-1|AAX33404.1|  608|Drosophila melanogaster RE58038p
           protein.
          Length = 608

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 301 NWTPEM*RATTYIRKRDGTYARPRRYTCQTTTQDRSVCPLRKTSPTVRRT 450
           NW  +  R    +RKRDGT+       C    +   +CP     P + RT
Sbjct: 59  NWHFQNQRRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRT 108


>AE014297-3282|AAO41594.1|  599|Drosophila melanogaster CG4620-PB,
           isoform B protein.
          Length = 599

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 301 NWTPEM*RATTYIRKRDGTYARPRRYTCQTTTQDRSVCPLRKTSPTVRRT 450
           NW  +  R    +RKRDGT+       C    +   +CP     P + RT
Sbjct: 50  NWHFQNQRRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRT 99


>AE014297-3281|AAO41593.1|  599|Drosophila melanogaster CG4620-PA,
           isoform A protein.
          Length = 599

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 301 NWTPEM*RATTYIRKRDGTYARPRRYTCQTTTQDRSVCPLRKTSPTVRRT 450
           NW  +  R    +RKRDGT+       C    +   +CP     P + RT
Sbjct: 50  NWHFQNQRRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRT 99


>AE014297-3267|AAF56093.1|  660|Drosophila melanogaster CG13830-PA
           protein.
          Length = 660

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 355 TYARPRRYTCQT-TTQDRSVCPLRKTSPTVRRTHIASRLCIATGRW 489
           T +RPRR    T TT   S  P R+T P+ RRT   S  C    RW
Sbjct: 372 TLSRPRRSNMTTSTTSTSSTRPTRRT-PSTRRT---STRCATITRW 413


>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
           protein.
          Length = 1795

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 19/52 (36%), Positives = 21/52 (40%)
 Frame = +1

Query: 295 TTNWTPEM*RATTYIRKRDGTYARPRRYTCQTTTQDRSVCPLRKTSPTVRRT 450
           TT  T    R TT   K      +PR     TTTQ RS      TSP  + T
Sbjct: 508 TTAKTTTTKRPTTVTEKTSSATEKPRTTVVTTTTQKRST-TTHNTSPDTKTT 558


>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
           protein.
          Length = 1795

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 19/52 (36%), Positives = 21/52 (40%)
 Frame = +1

Query: 295 TTNWTPEM*RATTYIRKRDGTYARPRRYTCQTTTQDRSVCPLRKTSPTVRRT 450
           TT  T    R TT   K      +PR     TTTQ RS      TSP  + T
Sbjct: 508 TTAKTTTTKRPTTVTEKTSSATEKPRTTVVTTTTQKRST-TTHNTSPDTKTT 558


>AE014296-2277|AAF49818.2|  316|Drosophila melanogaster CG10154-PA
           protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = -2

Query: 615 CSSIH-WHRHCCPPIRSRQSRPPFCSKSKMANATSDFDNRSVFP---SPCSYA*TRCYVS 448
           CS+ H W + C P +    S    C  +K  N T D   R++ P   +P   A  +C + 
Sbjct: 210 CSNGHPWEQQCAPGLAYNPSCK-CCDFAKNVNCTIDAVARNILPYSRTPLRRADIKCPLM 268

Query: 447 ATH 439
            TH
Sbjct: 269 GTH 271


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,143,613
Number of Sequences: 53049
Number of extensions: 773676
Number of successful extensions: 2349
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2348
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)