Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0289
         (483 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.5  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   1.5  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   2.6  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 218 PHFCISMDFIVLAFRSWLR*HINVT*TVYRLFTLDC*FA*RICLSVR 358
           P  C   D+  +  +S L  H+     VYR    DC +A + C S++
Sbjct: 258 PFQCNKCDYTCVN-KSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLK 303


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 218 PHFCISMDFIVLAFRSWLR*HINVT*TVYRLFTLDC*FA*RICLSVR 358
           P  C   D+  +  +S L  H+     VYR    DC +A + C S++
Sbjct: 16  PFQCNKCDYTCVN-KSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLK 61


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 36  KSNIPTCFESFCVSRSEKRK 95
           K N+P   E+ C   SEK+K
Sbjct: 66  KKNMPDAIETDCSKCSEKQK 85


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 473 HHSWKDNLNRKIH*YKRSLKLKINLKIYFIDNIR 372
           +  W+  L R+     R+LKL   L++Y I+N++
Sbjct: 344 YRHWQIPLGRRF----RALKLWFVLRLYGIENLQ 373


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 128 NVSST*ILIKWFSF 87
           NVSS  I  KW SF
Sbjct: 577 NVSSIPIYFKWLSF 590


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 128 NVSST*ILIKWFSF 87
           NVSS  I  KW SF
Sbjct: 577 NVSSIPIYFKWLSF 590


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 42  NIPTCFESFCVSRSEKRKP 98
           N P C++S C   +   KP
Sbjct: 757 NYPVCWQSNCKKGASSDKP 775


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,119
Number of Sequences: 336
Number of extensions: 1816
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)