Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0289
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   5.5  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   5.5  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    22   9.6  
AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical prote...    22   9.6  
AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosens...    22   9.6  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    22   9.6  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -2

Query: 473 HHSWKDNLNRKIH*YKRSLKLKINLKIYFIDNIRRC*YIALKDKYAKQISS 321
           +  W+  L R+     R+LKL   L++Y +DN++   +I     +AKQ  +
Sbjct: 350 YRHWQIPLGRRF----RALKLWFVLRLYGVDNLQA--HIRRHCAFAKQFEA 394


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -2

Query: 473 HHSWKDNLNRKIH*YKRSLKLKINLKIYFIDNIRRC*YIALKDKYAKQISS 321
           +  W+  L R+     R+LKL   L++Y +DN++   +I     +AKQ  +
Sbjct: 381 YRHWQIPLGRRF----RALKLWFVLRLYGVDNLQA--HIRRHCAFAKQFEA 425


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 267 GCVNTSMLLELFIGYLHWTANLLSVFVFQCDVLTAPN 377
           G V    LL L +  LH +     +F F  DV+ +PN
Sbjct: 14  GTVAIVQLLLLTV-LLHPSVGAQELFAFPADVVVSPN 49


>AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical protein
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 36  KSNIPTCFESFCVSRSEKRK 95
           K N+P    S CV  SEK++
Sbjct: 63  KDNLPDALMSDCVKCSEKQR 82


>AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosensory
           protein CSP3 protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 36  KSNIPTCFESFCVSRSEKRK 95
           K N+P    S CV  SEK++
Sbjct: 63  KDNLPDALMSDCVKCSEKQR 82


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 386 IDNIRRC*YIALKDKYAKQISSPM*ITDKQF 294
           +DN+ +   + + D+  K    P  ++D+QF
Sbjct: 537 VDNLAKVQEMVILDRLTKYTEGPHGLSDRQF 567


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,095
Number of Sequences: 2352
Number of extensions: 7825
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)