Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0288
(440 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4S1I5 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 0.89
UniRef50_UPI000023EB0A Cluster: hypothetical protein FG08993.1; ... 34 1.6
UniRef50_Q6YVX9 Cluster: U2 snRNP auxiliary factor-like protein;... 33 3.6
UniRef50_UPI0000E7FE8B Cluster: PREDICTED: hypothetical protein;... 32 4.7
UniRef50_UPI00004492E3 Cluster: PREDICTED: hypothetical protein;... 32 4.7
UniRef50_A3UCB9 Cluster: Riboflavin biosynthesis protein RibD; n... 32 4.7
UniRef50_A5KCY1 Cluster: Variable surface protein Vir 12/22/24-l... 32 4.7
UniRef50_UPI0000D55943 Cluster: PREDICTED: similar to Pleckstrin... 32 6.3
UniRef50_Q8Z1L7 Cluster: Putative uncharacterized protein STY452... 32 6.3
UniRef50_Q2LUB9 Cluster: Hypothetical membrane protein; n=1; Syn... 31 8.3
UniRef50_A3BEF2 Cluster: Putative uncharacterized protein; n=4; ... 31 8.3
UniRef50_Q177P0 Cluster: Transcription initiation factor TFIID s... 31 8.3
UniRef50_Q4P7U4 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
UniRef50_Q8J1G4 Cluster: Kinesin-like protein KIP1; n=1; Eremoth... 31 8.3
>UniRef50_A4S1I5 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 424
Score = 34.7 bits (76), Expect = 0.89
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -2
Query: 358 STTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGFD 209
S +PR + S S R R+ D RSRD R ++ D DLRD G+D
Sbjct: 224 SRSPRHRSRRSRSRSRSRSRSPRRSDRRSRDDRDRR--DRRDLRDSRGYD 271
>UniRef50_UPI000023EB0A Cluster: hypothetical protein FG08993.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG08993.1 - Gibberella zeae PH-1
Length = 927
Score = 33.9 bits (74), Expect = 1.6
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = -2
Query: 433 FFFLFYESPGAGLSLNRSQHDAALPSTTPRQER-KSSTDYSEPRHRTELYPDLRSRDARV 257
F +L ++ L+ SQ A P TP+++R T + PR +L+P +D+R+
Sbjct: 706 FIWLVFDDQEPASKLDDSQSTA--PPETPKKQRIVQITPTTTPR---KLFPSKEKKDSRI 760
Query: 256 KKKTDSIDLRDPNGFDXASRVLNAKRD 176
KKK L+ P A R+ AK +
Sbjct: 761 KKKKTKKTLKGPI-IARAPRIKRAKHN 786
>UniRef50_Q6YVX9 Cluster: U2 snRNP auxiliary factor-like protein;
n=4; Magnoliophyta|Rep: U2 snRNP auxiliary factor-like
protein - Oryza sativa subsp. japonica (Rice)
Length = 401
Score = 32.7 bits (71), Expect = 3.6
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -2
Query: 361 PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 233
PS TP ER S+D PR Y R+RD K+ S D
Sbjct: 88 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRD 130
>UniRef50_UPI0000E7FE8B Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 428
Score = 32.3 bits (70), Expect = 4.7
Identities = 23/73 (31%), Positives = 31/73 (42%)
Frame = -2
Query: 409 PGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDL 230
PGA SL R A PS TPR R+S S R E A V+++ +
Sbjct: 231 PGAPRSLARPTRAARPPSLTPRPHRRSGCKVSPERRGAERSRSGGGAGAEVRRRGGAGGR 290
Query: 229 RDPNGFDXASRVL 191
R G A+R++
Sbjct: 291 RGWGGCSAAARLV 303
>UniRef50_UPI00004492E3 Cluster: PREDICTED: hypothetical protein;
n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 147
Score = 32.3 bits (70), Expect = 4.7
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = +3
Query: 195 TRDAXSNPFGSRRSMLSVFFLTRASRLRRSGYNSVRCRGSE*SVDDFRSWRGVVLGRAAS 374
TR G R S + A LR S S G E +F+ W+G S
Sbjct: 54 TRGVRLQAIGVRPSRFAAGGRKEAPELRSSSRGSNNALGREKCGAEFKGWKGKDRALCNS 113
Query: 375 CCDLLRLSPA 404
C + +R SPA
Sbjct: 114 CAESIRQSPA 123
>UniRef50_A3UCB9 Cluster: Riboflavin biosynthesis protein RibD; n=1;
Oceanicaulis alexandrii HTCC2633|Rep: Riboflavin
biosynthesis protein RibD - Oceanicaulis alexandrii
HTCC2633
Length = 210
Score = 32.3 bits (70), Expect = 4.7
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = -3
Query: 282 TFGAVMHVLRKKPIASISAIQMGSTXRLAF*MRNATSKVTLFRASRLSGLHSEHILAGFG 103
+F AVM L + + S+ I+ G A + +++ FRA RL G +AG G
Sbjct: 123 SFSAVMQSLAARGVGSVM-IEAGREIAGAAIRSDCVTRIEWFRAPRLIGAEGRACIAGLG 181
Query: 102 *AGSALEASGIIPRMELRTTG 40
L + RME+R G
Sbjct: 182 --LEELSLAPTFKRMEVRACG 200
>UniRef50_A5KCY1 Cluster: Variable surface protein Vir
12/22/24-like; n=2; Plasmodium vivax|Rep: Variable
surface protein Vir 12/22/24-like - Plasmodium vivax
Length = 359
Score = 32.3 bits (70), Expect = 4.7
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 439 FFFFFLFYESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDA 263
F FFFLFY+ G LN+S ++E++ YS +R P R R A
Sbjct: 297 FMFFFLFYKFTPIGSRLNKSSRRKKEKEYNVKKEQRKEIVYSNSENRNINVPKGRVRIA 355
>UniRef50_UPI0000D55943 Cluster: PREDICTED: similar to Pleckstrin
homology domain-containing family G member 1; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to
Pleckstrin homology domain-containing family G member 1
- Tribolium castaneum
Length = 1421
Score = 31.9 bits (69), Expect = 6.3
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = -2
Query: 415 ESPGAGLSLNRSQHDAALPSTTPRQE---RKSSTDYSEPR--HRTELYPDLRSRDARVKK 251
+SP G N S + + P QE R +S + PR +RT +Y LRS + + +
Sbjct: 347 KSPQVGNFANLSPCVQKILANVPDQELSKRFNSEETLGPRRGNRTSIYRSLRSPEKHLNR 406
Query: 250 KTDSIDLRDPN 218
+S+D+ PN
Sbjct: 407 SNESLDIISPN 417
>UniRef50_Q8Z1L7 Cluster: Putative uncharacterized protein STY4528;
n=1; Salmonella typhi|Rep: Putative uncharacterized
protein STY4528 - Salmonella typhi
Length = 447
Score = 31.9 bits (69), Expect = 6.3
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = -2
Query: 418 YESPGAGLSLN--RSQHDAALPSTTPRQER--KSSTDYSEPRHRTELYPDLRSRDA-RVK 254
+++PG GLSLN +++H + P P ER KS + S +++ Y +R D V+
Sbjct: 235 HQNPGTGLSLNSIKNEHKSLSPVNRPSSERGEKSPSPDSRLSLKSDSYDRVRQPDCNNVR 294
Query: 253 KKTDSI 236
T S+
Sbjct: 295 SFTQSV 300
>UniRef50_Q2LUB9 Cluster: Hypothetical membrane protein; n=1;
Syntrophus aciditrophicus SB|Rep: Hypothetical membrane
protein - Syntrophus aciditrophicus (strain SB)
Length = 90
Score = 31.5 bits (68), Expect = 8.3
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 218 WVRRRVSRFECETRLVKS--HCLEPPDSRGSTV 126
+++R V + CE+R+ +S HCL P SRG+ +
Sbjct: 33 YIKRGVPAYRCESRVGQSNFHCLNIPSSRGTEI 65
>UniRef50_A3BEF2 Cluster: Putative uncharacterized protein; n=4;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 659
Score = 31.5 bits (68), Expect = 8.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 91 RTSLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRTHLDRGD 234
R + A +GK + E E S+QCD T + +S RE +R + G+
Sbjct: 424 RAAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSREKKRNPYAAAGE 471
>UniRef50_Q177P0 Cluster: Transcription initiation factor TFIID
subunit 1; n=3; Endopterygota|Rep: Transcription
initiation factor TFIID subunit 1 - Aedes aegypti
(Yellowfever mosquito)
Length = 1962
Score = 31.5 bits (68), Expect = 8.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 91 RTSLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRT 216
RT L + K+ ++ + R GG CD+ R H+K RRRT
Sbjct: 1405 RTLLLKVPKEAVSKKRRRVGGDANCDYLKR--HNKTANRRRT 1444
>UniRef50_Q4P7U4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 829
Score = 31.5 bits (68), Expect = 8.3
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = -2
Query: 430 FFLFYESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKK 251
FF+ +G +++R A +P + R +S + P P L S A +K+
Sbjct: 526 FFVLRAQNTSGSTMSRLFERAMIPRSPHPLRRVASNTWQSPGVNETATPMLTSSHALLKR 585
Query: 250 KTDSIDLRDPNGFDXASR 197
K+ + PN D +S+
Sbjct: 586 KSQKLASSPPNSSDSSSK 603
>UniRef50_Q8J1G4 Cluster: Kinesin-like protein KIP1; n=1;
Eremothecium gossypii|Rep: Kinesin-like protein KIP1 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 1129
Score = 31.5 bits (68), Expect = 8.3
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -2
Query: 391 LNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSI 236
L RS+ + +P+TT ++ R S EP + ++Y RSR+ R ++ S+
Sbjct: 25 LARSR-SSTMPTTTQKRVRSSQQSEGEPEYNIKVYVRCRSRNEREIREKSSV 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,432,235
Number of Sequences: 1657284
Number of extensions: 9937086
Number of successful extensions: 29825
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29774
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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